PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN05351.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

CAMTA

Protein Properties

Length: 915aa MW: 103178 Da PI: 7.8761

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN05351.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	165.1	1.2e-51	26	143	2	118
CG-1 2 lke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcy 99 ++e k+rwl+++ei+a+L n++ +++ ++ + pksg++++++rk++r+frkDGy+wkkkkdgktv+E+he+LKvg+ve +++yYah+e++ptf rrcy PIN05351.1 26 MEEaKSRWLRPNEIHAMLSNHKYFTVNVKPMNLPKSGTIVFFDRKMLRNFRKDGYNWKKKKDGKTVKEAHEHLKVGNVERIHVYYAHGEQKPTFVRRCY 124 55669******************************************************************************************** PP CG-1 100 wlLeeelekivlvhylevk 118 wlL+++le+ivlvhy+e++ PIN05351.1 125 WLLDKSLEHIVLVHYRETQ 143 **************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 915 aa Download sequence
MESDKLVGSE IHGFRTMEDL DVDNMMEEAK SRWLRPNEIH AMLSNHKYFT VNVKPMNLPK 60 SGTIVFFDRK MLRNFRKDGY NWKKKKDGKT VKEAHEHLKV GNVERIHVYY AHGEQKPTFV 120 RRCYWLLDKS LEHIVLVHYR ETQEGSPAAS GSSHSSSGAS DPPAPRPLLE ESDSTGDRAY 180 YGGNESLLER QDSMTIKYHQ QRLHEINTLD WDELVVPDDP NKMIALQQAT GNSAVFEQTN 240 QYLMNSYKIV DDASAMNKVT PESSVDSFPG QVTGNNSIDY NISNDVPYPR DIIVDSQSSV 300 SGLGLLPEKG SLQPQDSFDR WVANIIADTP GALDNQVVES SISTGNQSFS APTTDDHLRS 360 ALGQIFNITD ISPSWALSTE ETKILVVGVF NGGQVPNAVS NLHLACGDSI VPVETVQAGV 420 FRCVILPQTP GLVNLYLSLD GHKPISQVIN FQFRAPVVPN QSISLPDKSN WEEFQIQMRL 480 AHLLFSSSKS LSIFSTKVSP SNLREAKSLA QKISYISNGW VHLSKTIKDA KIPFPQAKDD 540 LFELILRNRL QEWLLEKVAA GCKISERDKQ GQGVIHLCAI LGYTWAVLPF SCSGLSMDYR 600 DKYGWTALHW AAYYGREKTV AALLSAGAKP YLVTDPTSEN PSGCTPADLA YKNGFEGLAG 660 YLAEKALLAQ FNDMTLAGNV SGSLQTTSSE IVNPENFTEE ELYLKDTLAA YRTAADAAAR 720 IHSAFRERSL KLRTEAVEAS TPEMEARNII AAMKIQHAFR NYESRKKLAA ASRIQYRFRT 780 WKIRKDFLNM RRQAVKIQAA FRAFQARKQY CKIVWSVGIL EKAVLRWRMK RKGFRGLQVQ 840 LSDTSEDPNQ ENDAEEDFFK ASRKQAEERV ERSVIRVQAM FRSKRAQEDY RRMKLEHNKA 900 TLEYEGLLHP DVEMR

Sequence ? help Back to Top

Protein Sequence Length: 915 aa Download sequence

MESDKLVGSE IHGFRTMEDL DVDNMMEEAK SRWLRPNEIH AMLSNHKYFT VNVKPMNLPK  60
SGTIVFFDRK MLRNFRKDGY NWKKKKDGKT VKEAHEHLKV GNVERIHVYY AHGEQKPTFV  120
RRCYWLLDKS LEHIVLVHYR ETQEGSPAAS GSSHSSSGAS DPPAPRPLLE ESDSTGDRAY  180
YGGNESLLER QDSMTIKYHQ QRLHEINTLD WDELVVPDDP NKMIALQQAT GNSAVFEQTN  240
QYLMNSYKIV DDASAMNKVT PESSVDSFPG QVTGNNSIDY NISNDVPYPR DIIVDSQSSV  300
SGLGLLPEKG SLQPQDSFDR WVANIIADTP GALDNQVVES SISTGNQSFS APTTDDHLRS  360
ALGQIFNITD ISPSWALSTE ETKILVVGVF NGGQVPNAVS NLHLACGDSI VPVETVQAGV  420
FRCVILPQTP GLVNLYLSLD GHKPISQVIN FQFRAPVVPN QSISLPDKSN WEEFQIQMRL  480
AHLLFSSSKS LSIFSTKVSP SNLREAKSLA QKISYISNGW VHLSKTIKDA KIPFPQAKDD  540
LFELILRNRL QEWLLEKVAA GCKISERDKQ GQGVIHLCAI LGYTWAVLPF SCSGLSMDYR  600
DKYGWTALHW AAYYGREKTV AALLSAGAKP YLVTDPTSEN PSGCTPADLA YKNGFEGLAG  660
YLAEKALLAQ FNDMTLAGNV SGSLQTTSSE IVNPENFTEE ELYLKDTLAA YRTAADAAAR  720
IHSAFRERSL KLRTEAVEAS TPEMEARNII AAMKIQHAFR NYESRKKLAA ASRIQYRFRT  780
WKIRKDFLNM RRQAVKIQAA FRAFQARKQY CKIVWSVGIL EKAVLRWRMK RKGFRGLQVQ  840
LSDTSEDPNQ ENDAEEDFFK ASRKQAEERV ERSVIRVQAM FRSKRAQEDY RRMKLEHNKA  900
TLEYEGLLHP DVEMR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16150.1	0.0	CAMTA family protein