PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN04837.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

Dof

Protein Properties

Length: 511aa MW: 55590.6 Da PI: 5.1674

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN04837.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	125.5	1.7e-39	146	206	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++k+l+cprC+s++tkfCy+nny+++qPr+fCk+C+ryWt+GG++rnvPvG+grrknk+s PIN04837.1 146 PDKILPCPRCNSMDTKFCYFNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKNSV 206 7899******************************************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 511 aa Download sequence
MSEVKDPKIK LFGKTIELPE TATAVAEESG GAVSAQSCEV AVEDSLNQDP PCSSNSMLED 60 SNMNRDAEEQ EASKTLSGPE QDNAKEEDRA PPLTSEEPKD SNTNQPIIED PCAPSAESEA 120 GQAKMSKSEE DQSETSNSQE KTLKKPDKIL PCPRCNSMDT KFCYFNNYNV NQPRHFCKNC 180 QRYWTAGGTM RNVPVGAGRR KNKNSVSQFR HLTVPEALQT ARVDLPNGIH HPALNPNGTV 240 LTFSSDSPLC ESMASVLNIV DKTMRNSSRN GFQKPEEVGI SVSHGNKENR DDQSSRSSAG 300 ASSSKGTEVG KTGLPELMPN CHPFPPQVPC YPGAPWPYPW NSVPWSSSPP AFGPGSFPVP 360 FYSSVPPYWG CAVPGPWNVP WVIPPTGSSQ TPLSSSPNSP TLGKHSRDDN VHKLADLKED 420 EMVKENNLEK CLWVPKTLRI DDPGEAAKSS IWATLGIQND RVDSIGGGRL FRAFESQSLK 480 DDSKTKVPET ATVLQANPAA FSRSLSFHES S

Sequence ? help Back to Top

Protein Sequence Length: 511 aa Download sequence

MSEVKDPKIK LFGKTIELPE TATAVAEESG GAVSAQSCEV AVEDSLNQDP PCSSNSMLED  60
SNMNRDAEEQ EASKTLSGPE QDNAKEEDRA PPLTSEEPKD SNTNQPIIED PCAPSAESEA  120
GQAKMSKSEE DQSETSNSQE KTLKKPDKIL PCPRCNSMDT KFCYFNNYNV NQPRHFCKNC  180
QRYWTAGGTM RNVPVGAGRR KNKNSVSQFR HLTVPEALQT ARVDLPNGIH HPALNPNGTV  240
LTFSSDSPLC ESMASVLNIV DKTMRNSSRN GFQKPEEVGI SVSHGNKENR DDQSSRSSAG  300
ASSSKGTEVG KTGLPELMPN CHPFPPQVPC YPGAPWPYPW NSVPWSSSPP AFGPGSFPVP  360
FYSSVPPYWG CAVPGPWNVP WVIPPTGSSQ TPLSSSPNSP TLGKHSRDDN VHKLADLKED  420
EMVKENNLEK CLWVPKTLRI DDPGEAAKSS IWATLGIQND RVDSIGGGRL FRAFESQSLK  480
DDSKTKVPET ATVLQANPAA FSRSLSFHES S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39660.1	2e-86	Dof family protein