PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN04592.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family HD-ZIP
Protein Properties Length: 706aa    MW: 78423.7 Da    PI: 6.6853
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN04592.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox59.94.2e-192580156
                TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
    Homeobox  1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                r++ +++t++q+++Le++F+++++p++++r  L+++l+L  rq+k+WFqNrR++ k
  PIN04592.1 25 RKRYHRHTAHQIQRLEAVFKECPHPDEKTRNLLSRELNLHPRQIKFWFQNRRTQLK 80
                789999**********************************************9877 PP
2START182.72e-572214422206
                 HHHHHHHHHHHHHHHC-TT-EEEE......EXCCTTEEEEEEESSS.....SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEEEEC CS
       START   2 laeeaaqelvkkalaeepgWvkss......esengdevlqkfeeskv....dsgealrasgvvdmvlallveellddkeqWdetla....kaetlevis 86 
                 +a  a++el+k+ +++ p+W kss       +e++++  q++ ++       ++ea+r+sgvv+m++  lv+ ++d + +W e ++    +a t+evis
  PIN04592.1 221 IAANAMDELIKLLQSNGPLWIKSSdgrerlNNETYETLFQSPNSQ-MknpnIRVEASRDSGVVIMNSLALVNMFMDAN-KWVELFPtivaRARTIEVIS 317
                 67889**********************777777777777777554.359999**************************.***99999999********* PP

                 TT...EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXX.HHH CS
       START  87 sg...galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehvdlkgrlp.hwl 180
                 sg   g+l lm  elq+ls lvp R f+f+R+++q ++g+w++vdvS d +++    ss+ +a++lpSg+li++++ng+skvtwveh++++++ p h+l
  PIN04592.1 318 SGsqsGTLLLMHEELQVLSALVPtRQFYFLRFCQQIEQGSWAVVDVSYDTPSQDRHYSSSCKARRLPSGCLIQDMPNGYSKVTWVEHWEVEDKEPiHSL 416
                 ***********************************************9999888879****************************************** PP

                 HHHHHHHHHHHHHHHHHHHTXXXXXX CS
       START 181 lrslvksglaegaktwvatlqrqcek 206
                 +r l++sgla ga +w++ lqr ce+
  PIN04592.1 417 YRDLIHSGLAYGAERWLSSLQRICER 442
                 ************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 706 aa     Download sequence    
MEFSGGGGSS GGDHHDDGSE SHHRRKRYHR HTAHQIQRLE AVFKECPHPD EKTRNLLSRE  60
LNLHPRQIKF WFQNRRTQLK AQHERQDNCA LRAENDKIRC ENIAIREALK NVICPSCGGP  120
PVSEDSYFDE QKLRIENAHL KEELDRVSSI AAKYIGRPIA QLPPVQPIHL SSLDLSMSNF  180
GGPSLDLDLD LLRGSSSNII SNLAFPPINI SDMDKSLMAD IAANAMDELI KLLQSNGPLW  240
IKSSDGRERL NNETYETLFQ SPNSQMKNPN IRVEASRDSG VVIMNSLALV NMFMDANKWV  300
ELFPTIVARA RTIEVISSGS QSGTLLLMHE ELQVLSALVP TRQFYFLRFC QQIEQGSWAV  360
VDVSYDTPSQ DRHYSSSCKA RRLPSGCLIQ DMPNGYSKVT WVEHWEVEDK EPIHSLYRDL  420
IHSGLAYGAE RWLSSLQRIC ERLACLMVTA NSSRDLGGVI PSPEGKRSMM KLAQRMVNNF  480
CTSINPSNGQ QWTTLSGLNE FEVRATLHKT TDPGQPTGVV LSAAATIWLP LSPQNVFNFF  540
RDERTRPQWD VLSNQNPVQE VAHIANGSHP GNCISVLRAF NASQNNMLIL QESCIDSSGS  600
LVVYCPIELP AINLAMSGED PSYIPLLPSG FTISPDGKLE HRGVPTDGAS TSSNVNSSGS  660
LITVVFQILV SNLPTARMSP ESVTTVNNLI GNTVHHIKAA LNCTSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73360.10.0HD-ZIP family protein