PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN04516.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

Dof

Protein Properties

Length: 300aa MW: 32303.3 Da PI: 5.3442

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN04516.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	123.1	9.5e-39	33	91	3	61
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 ++alkcprCds ntkfCyynny+lsqPr+fCk+CrryWtkGG lrnvPvGgg+rk k+s PIN04516.1 33 HQALKCPRCDSLNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGVLRNVPVGGGCRKTKRS 91 6899****************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 300 aa Download sequence
MQDMHGVGDG SGGGGRFFSG GDRRLRPHGY PNHQALKCPR CDSLNTKFCY YNNYNLSQPR 60 HFCKSCRRYW TKGGVLRNVP VGGGCRKTKR SKPKSSPASS AGDAPRESKS NAQSSSSESS 120 SLTAAATSTI PTSASTAVVE EGSAPSTEAS DSAVVYNIAD TRFCNVNPQP NPSFNHQPLV 180 NNPSTDGQIF SDEIGSFSSL MTSQEEMMPF GLGEIRTTQY PRAQQMNHAP EAENPGPGST 240 AVDEFKMEDM SNEGLPAILD WGSGGDGGDQ SLFDLTAGMD PAYWNQSQWT DNDQSLNYLP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60850.1	1e-46	Dof family protein