PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN04510.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family bHLH
Protein Properties Length: 314aa    MW: 35728.9 Da    PI: 8.1988
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN04510.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH406.8e-13135182355
                 HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 + h ++Er+RR+++ ++f  L  l+P +     kK++Ka++L  A++Y+k+Lq
  PIN04510.1 135 QDHIMAERKRREKLSQRFIALSALVPGL-----KKMDKASVLGDAIKYMKQLQ 182
                 6799************************.....9******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    
MEISNFNQFL DDPMFFQQWP MDAPEDLSSL SRLCDDFQYQ SYHNQQPLLE FKRVVESGHD  60
GSNRPLKQMK TTAWKSGNQV DLVKPKEETW SSSSTISFPC ESIVTQTSFE NQNYVLKPCQ  120
GAKRISTSTR LAQAQDHIMA ERKRREKLSQ RFIALSALVP GLKKMDKASV LGDAIKYMKQ  180
LQEKVKTLEE QTKKRTMESV VFVKKYEVYT DAENSSSSDS FSSGPITTMP LPEIEARFCN  240
KDVLISIHCE KRKGVLEKTV AEIEKLHLSV VNSSIMTFGD SALNITVIAQ KDEGFAMNMK  300
ELVKNLRDSL KSLI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1141146ERKRRE
2142147RKRREK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.13e-65bHLH family protein