PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN04431.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

NAC

Protein Properties

Length: 312aa MW: 35625.2 Da PI: 7.138

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN04431.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	179.9	6.6e-56	15	141	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 lppGfrFhPtdeel+++yL +kv ++++ + ++i evd++kvePwdLp k+k +ekewyfF+ rd+ky+tg r+nrat++gyWkatgkdke+++ + l PIN04431.1 15 LPPGFRFHPTDEELITYYLSPKVLNSSFCT-KAIGEVDLNKVEPWDLPWKAKMGEKEWYFFCIRDRKYPTGLRTNRATEAGYWKATGKDKEIFR-AKIL 111 79***********************988.88***********888999*************************************.999 PP NAM 100 vglkktLvfykgrapkgektdWvmheyrle 129 vg+kktLvfy+grap+gekt+Wvmheyrle PIN04431.1 112 VGMKKTLVFYRGRAPRGEKTNWVMHEYRLE 141 ****************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 312 aa Download sequence
MERPSFNTGD EPIELPPGFR FHPTDEELIT YYLSPKVLNS SFCTKAIGEV DLNKVEPWDL 60 PWKAKMGEKE WYFFCIRDRK YPTGLRTNRA TEAGYWKATG KDKEIFRAKI LVGMKKTLVF 120 YRGRAPRGEK TNWVMHEYRL EGKNSIPNLP KSAKHEWVIC RVFKKISGGK KVHISGLVRG 180 KDCGNDLPPL MDFSDENRTM AIASGEGSHV TCFSTPMEDP RDKSADEFSS YSNNKISNPN 240 TMFSSCTGNL HYSDSVWMQD QSLLRHLLEG NGSCTKQNPK PEFFDDIGLN DEGFNPIISS 300 GEQVEYDGLW NY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G61430.1	1e-110	NAC family protein