PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN04171.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | MYB_related | ||||||||
Protein Properties | Length: 228aa MW: 25304.5 Da PI: 4.3997 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 46.7 | 7.2e-15 | 14 | 75 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT................-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg................tWktIartmgkgRtlkqcksrwqky 47 +g+WT++Ed +l+ + G W++Ia++++ gRt++++k++w+++ PIN04171.1 14 KGPWTADEDRKLISFILANGQCcwrtlpklaetliyvmMWSKIASHLP-GRTDNEIKNHWNTH 75 79******************99**************************.************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 228 aa Download sequence |
MGRQPCCEKV GLKKGPWTAD EDRKLISFIL ANGQCCWRTL PKLAETLIYV MMWSKIASHL 60 PGRTDNEIKN HWNTHIKKKL KKMGIDPVTH KPLLPPTTDQ PPPEVAAEEL ELAADTTSLH 120 QSTTEESAKD KITSPVGPID LLVNNIDDFC IDEVPVIEPH EILLDSDNNS STPSSSSSSS 180 SSNLSSCTSN GLEDLQLSPT FDEYYSEIMN SNIWDDDFCN SLDLFGLL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G16600.1 | 3e-51 | MYB family protein |