PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN04145.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 199aa MW: 23093 Da PI: 8.4805 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 60.8 | 2.1e-19 | 13 | 66 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +R +f+++q++ Le+ Fe + p + +++LA+klgL+ rqV +WFqN+Ra+ k PIN04145.1 13 NRKRFSDDQIKSLETTFETEARPELRLKQHLANKLGLQPRQVAIWFQNKRARSK 66 799*************************************************99 PP | |||||||
2 | HD-ZIP_I/II | 105.2 | 5.2e-34 | 13 | 104 | 2 | 93 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 +++r+s++q+k+LE++Fe+e + e + K++la++Lglqprqva+WFqn+RAR k+kq+E++y+ Lk++yd+l+ + e+L+ke+++L ++++ PIN04145.1 13 NRKRFSDDQIKSLETTFETEARPELRLKQHLANKLGLQPRQVAIWFQNKRARSKSKQMEREYSILKSNYDKLALQFEALRKENQTLLIQVQR 104 689***********************************************************************************988875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 199 aa Download sequence |
MSTSIKKASK NNNRKRFSDD QIKSLETTFE TEARPELRLK QHLANKLGLQ PRQVAIWFQN 60 KRARSKSKQM EREYSILKSN YDKLALQFEA LRKENQTLLI QVQRLRKMAD KIDGEQNDNK 120 NHIKLATSEN PRFLVDINSH ELCIPNDISR KADFLEEEAD VLNMVQLAEG SLASPENGCS 180 FDSCTFLDNT SNSPQWWDF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46680.1 | 1e-43 | HD-ZIP family protein |