PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN04077.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

MYB

Protein Properties

Length: 471aa MW: 52981.3 Da PI: 6.5125

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN04077.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	43.9	5.6e-14	22	66	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +W++eEd++l + ++ +G+++W+ Ia+++ +t qc+ rw++yl PIN04077.1 22 SWSQEEDDILREQIRIHGTENWTIIASKFK-DKTTRQCRRRWFTYL 66 6**************************9.***********97 PP
2	Myb_DNA-binding	45.2	2.2e-14	72	115	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g W++eEd ll +a k +G++ W+ Ia+ + gRt++ +k+r+ + PIN04077.1 72 KGGWSPEEDMLLCEAQKIYGNR-WTEIAKVVS-GRTDNAVKNRFTT 115 688*****************.*****.********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 471 aa Download sequence
MKKSKDGNNG EVPNKKERHI VSWSQEEDDI LREQIRIHGT ENWTIIASKF KDKTTRQCRR 60 RWFTYLNSDF KKGGWSPEED MLLCEAQKIY GNRWTEIAKV VSGRTDNAVK NRFTTLCKKR 120 AKCEALAKEN STTSYINLNN KRVIFRNGLN MDGGSESSGP LKKLRTYVSD TIENCNQGEN 180 LAGDFGVAHH LRRHPFAVSQ LHVKNMKEAS TDGSTNTNDK IQRTFLKKDD PKVHALMQQA 240 ELLSSLAIKV NTEKTNQSLE NAWMVLQDFL KQNKESDQLP VGNSDMNFEV EKFRELVEDL 300 RSFNEGSPSS RREGDVYESS PASSEYSTAS TLLSNVPCDK TEECEADICV LHQETGQEFQ 360 SDLLDNQQSF VEENGICHTA STNEAKNILA SDEIKADDGA LCGYSDMAFS SPLHVTPLFR 420 TLAAAIPSPK FSESEKHFLM KTLGMESATS PSSIINPPQT PSCKRSLLHC L

Sequence ? help Back to Top

Protein Sequence Length: 471 aa Download sequence

MKKSKDGNNG EVPNKKERHI VSWSQEEDDI LREQIRIHGT ENWTIIASKF KDKTTRQCRR  60
RWFTYLNSDF KKGGWSPEED MLLCEAQKIY GNRWTEIAKV VSGRTDNAVK NRFTTLCKKR  120
AKCEALAKEN STTSYINLNN KRVIFRNGLN MDGGSESSGP LKKLRTYVSD TIENCNQGEN  180
LAGDFGVAHH LRRHPFAVSQ LHVKNMKEAS TDGSTNTNDK IQRTFLKKDD PKVHALMQQA  240
ELLSSLAIKV NTEKTNQSLE NAWMVLQDFL KQNKESDQLP VGNSDMNFEV EKFRELVEDL  300
RSFNEGSPSS RREGDVYESS PASSEYSTAS TLLSNVPCDK TEECEADICV LHQETGQEFQ  360
SDLLDNQQSF VEENGICHTA STNEAKNILA SDEIKADDGA LCGYSDMAFS SPLHVTPLFR  420
TLAAAIPSPK FSESEKHFLM KTLGMESATS PSSIINPPQT PSCKRSLLHC L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02820.2	1e-150	MYB family protein