PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PIN04071.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
|
||||||||
Family | G2-like | ||||||||
Protein Properties | Length: 295aa MW: 31967.8 Da PI: 7.011 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 96.8 | 1.6e-30 | 105 | 158 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 +prl+Wtp+LH+rFv+av++L G+++A+Pkti++lm+v+gLt+e+v+SHLQkYRl PIN04071.1 105 RPRLVWTPQLHKRFVDAVAHL-GIKNAVPKTIMQLMSVDGLTRENVASHLQKYRL 158 59*******************.********************************8 PP | |||||||
2 | Myb_DNA-binding | 48.2 | 2.5e-15 | 107 | 157 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r+ WT+++++++vdav+ lG + +ktI++ m g+t++++ s++qky+ PIN04071.1 107 RLVWTPQLHKRFVDAVAHLGIKnaVPKTIMQLMSvDGLTRENVASHLQKYR 157 789*******************9***************************7 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 295 aa Download sequence |
MREEDSNWFS KWEDDLPSPG ELMPLSQSLI TPDLALAFNI PNPHQTLHHT PPPPQPHPPQ 60 STALSSQPNS SAEFDSTELS GAAAAGGGGA GGVPGSDEPA RTLKRPRLVW TPQLHKRFVD 120 AVAHLGIKNA VPKTIMQLMS VDGLTRENVA SHLQKYRLYL KRMQGISNNG GGGGNSPAAM 180 AAAGMDPATD HLFASSPVPA HFLSRANPDH FLPYVPVQAA AMQHHHQIAA QHHPQLQQQF 240 RHFGNSPPNG QFDHPFMRQS QPPPVQRIGT QPPSYAEDLE SNGRKVLTLF PTGDD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G10760.1 | 3e-70 | G2-like family protein |