PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN03955.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

FAR1

Protein Properties

Length: 529aa MW: 61988.9 Da PI: 7.8238

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN03955.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	37.1	1e-11	26	70	2	47
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk 47 fYneYA++vGFsvr+++ +k ++g+i+ +tf+C ++ +r+++k++ PIN03955.1 26 FYNEYARSVGFSVRRHTVHKD-TKGRIIYKTFCCACQSHRQKDKRD 70 9************999998.7778**************9988 PP

Sequence ? help Back to Top
Protein Sequence Length: 529 aa Download sequence
MSFGIDKEKV PKIVMEFDSE EAAYIFYNEY ARSVGFSVRR HTVHKDTKGR IIYKTFCCAC 60 QSHRQKDKRD VNVNCDRLET LQANDIDNLR IAPRVGFALL AKQVGGRENV GFIFEDYKNY 120 LRSKQNVEMK IGDTGGVLEY LQQKQLDDPN FFYAIQVDED DLMANILWVD AQMKPGYAHF 180 GDVMCFHTIY RKNKEGRPFA LLQTIVFGAT LLYNETTSTF SWLFDTFVKA MSGKKPQTIL 240 TDQDAIMVKA LAMKWPETCR RLCIWHIYQN AVIHLSITFA RFASFSKDFG SCIYDYEEEK 300 KQTFCVDLMT TQRSERMNGI LKRYVSYKGN LLQLFHHFDR LIEDHRYQEL KVDFRTSQST 360 PVASFPIEIL KHAINICTHE VFELFQDEVH KAYDSRVELC RESEQISEYK VTPFRKHYQH 420 TVWYDSSEGK VLCSCKRESG TMEEFGEKLT FVNAETSRGE RCIFRHSHCE HHTNFTFARR 480 EKLLVFRHLK RVWGKGSVAD FVSFFIGEVT MYKPMSLSSI MFVFEVSIY

Sequence ? help Back to Top

Protein Sequence Length: 529 aa Download sequence

MSFGIDKEKV PKIVMEFDSE EAAYIFYNEY ARSVGFSVRR HTVHKDTKGR IIYKTFCCAC  60
QSHRQKDKRD VNVNCDRLET LQANDIDNLR IAPRVGFALL AKQVGGRENV GFIFEDYKNY  120
LRSKQNVEMK IGDTGGVLEY LQQKQLDDPN FFYAIQVDED DLMANILWVD AQMKPGYAHF  180
GDVMCFHTIY RKNKEGRPFA LLQTIVFGAT LLYNETTSTF SWLFDTFVKA MSGKKPQTIL  240
TDQDAIMVKA LAMKWPETCR RLCIWHIYQN AVIHLSITFA RFASFSKDFG SCIYDYEEEK  300
KQTFCVDLMT TQRSERMNGI LKRYVSYKGN LLQLFHHFDR LIEDHRYQEL KVDFRTSQST  360
PVASFPIEIL KHAINICTHE VFELFQDEVH KAYDSRVELC RESEQISEYK VTPFRKHYQH  420
TVWYDSSEGK VLCSCKRESG TMEEFGEKLT FVNAETSRGE RCIFRHSHCE HHTNFTFARR  480
EKLLVFRHLK RVWGKGSVAD FVSFFIGEVT MYKPMSLSSI MFVFEVSIY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-60	FAR1 family protein