PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN03953.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

GRF

Protein Properties

Length: 336aa MW: 38369.8 Da PI: 8.7436

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN03953.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	79	4.5e-25	76	119	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrCrRtDGKkWRCs+++++++k+CErH+hrgr+rsrk++e PIN03953.1 76 DPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVE 119 79***************************************986 PP
2	QLQ	46.2	1.4e-16	10	44	2	36
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiq 36 +FT +Q+q+L+ Q+l+yKy+++++P+P++Ll+ i+ PIN03953.1 10 PFTVSQWQELEYQALVYKYIISGMPIPADLLFTIR 44 8******************************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 336 aa Download sequence
MMSSGRSRFP FTVSQWQELE YQALVYKYII SGMPIPADLL FTIRRSLDSS ISSKLLLHQP 60 QIGWSGFQMG FGRKIDPEPG RCRRTDGKKW RCSKEAYPDS KYCERHMHRG RNRSRKPVEI 120 LSQTSSTTTA VPSVTKKTDS YLTSAAVPLE SHFLYPHFSC SRPPGIGLSS SQENTTTTKL 180 FLESNAYNSH PPAKDYRDIN HGQWMKGESE EQAFFSEGNS NSGSSVNDSC WQLAPLTMGS 240 SLSQMKDKAY SSSRLGSGHH QKINHEHQHY YNCEVPLNIE RDDHHHSKKV MHHFLEEWSP 300 KDKDSWPNSE DKLSSQSTQL SISIPNSLHD FFMTQK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	7e-51	GRF family protein