PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN03908.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

NAC

Protein Properties

Length: 270aa MW: 31220.4 Da PI: 5.8655

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN03908.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	138.3	4.8e-43	9	139	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 p+GfrF Pt+eelv+++L++k++g++ ++++vi+ +diy+++P++Lp + a+ ++w+fF++r++++a+g r+nr t++gyWkatg+ +v+s++ PIN03908.1 9 PVGFRFYPTEEELVSFFLQNKLNGTRPDIDRVIPVLDIYDYNPSELPYlageYCPADGEQWFFFIPRQEREARGGRPNRLTTEGYWKATGSPGDVYSSQ 107 89*************************999***********545654555889************************************ PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrl 128 ++++g k+t+vfy grap+g+kt W m+ey++ PIN03908.1 108 NRVIGRKRTMVFYVGRAPNGRKTMWKMNEYKA 139 ****************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 270 aa Download sequence
MEDDREYFPV GFRFYPTEEE LVSFFLQNKL NGTRPDIDRV IPVLDIYDYN PSELPYLAGE 60 YCPADGEQWF FFIPRQEREA RGGRPNRLTT EGYWKATGSP GDVYSSQNRV IGRKRTMVFY 120 VGRAPNGRKT MWKMNEYKAT ASHDHEPPPS SSSTFATPQL MEEFSLCRIY KRSKCLRAFD 180 RRPPSEAVRG VQEAVAGPHH HRHHEAAAFN NQLHNPPAPD ITDNCSDSSS SSGDYMQTNN 240 YQSQYVDSGN NPYLATDREP LWDWDQFNFF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22380.1	4e-74	NAC family protein