PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN03688.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | NAC | ||||||||
Protein Properties | Length: 178aa MW: 20410.1 Da PI: 10.2737 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 70.3 | 5.3e-22 | 5 | 72 | 52 | 128 |
NAM 52 kaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 + ++kewyfF+kr +k +++ r+nr+t sg+Wkat + + +glkk+Lv+y+g+a kg+ktdW+mhe+rl PIN03688.1 5 NVGDKEWYFFCKRGRKFRNSIRPNRVTGSGFWKATVR-----D----CIGLKKSLVYYRGSAGKGTKTDWMMHEFRL 72 56899****************************9966.....3....69**************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 178 aa Download sequence |
MESINVGDKE WYFFCKRGRK FRNSIRPNRV TGSGFWKATV RDCIGLKKSL VYYRGSAGKG 60 TKTDWMMHEF RLPATHDKTT KPVDAKGIIA QEAELWTLCQ IFKRNVPYRK CILDWRSEPT 120 TKRSTTISPV DANSKTCSID SSNQNNYNII NFSAPVITQT QTPANQHYFS SHFSSPNN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G43000.1 | 3e-52 | NAC family protein |