PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN03657.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

NAC

Protein Properties

Length: 360aa MW: 41031 Da PI: 7.4116

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN03657.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	162.4	1.8e-50	24	149	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelv 100 +pGfrFhPt+eelv +yL++kvegk++++ e i+ +d+y+++Pw+Lp+ ++ +ekewyf+++rd+ky++g+r+nr+t+sgyWkatg d+ ++s++ + + PIN03657.1 24 MPGFRFHPTEEELVEFYLRRKVEGKRFNV-ELITFIDLYRYDPWELPALAAIGEKEWYFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIKSENLRSI 121 79*************************.89***********8778899***************************************** PP NAM 101 glkktLvfykgrapkgektdWvmheyrl 128 glkktLvfy+g+apkg +t+W+m+eyrl PIN03657.1 122 GLKKTLVFYSGKAPKGIRTSWIMNEYRL 149 ************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 360 aa Download sequence
MAIAAAMNNQ QNNKQDEHEQ DIVMPGFRFH PTEEELVEFY LRRKVEGKRF NVELITFIDL 60 YRYDPWELPA LAAIGEKEWY FYVPRDRKYR NGDRPNRVTT SGYWKATGAD RMIKSENLRS 120 IGLKKTLVFY SGKAPKGIRT SWIMNEYRLP HHETERLQKA EISLCRVYKR AGVDDHASLP 180 RSLPTKSKSK NHTIDIFQAT YGGSSQQNDA KIVESSPSSS ADIGTNLALS QQNSYAISPI 240 VPMDQTPSIS PDDDHRIMMM QQSKNSCSNM IFSSSSSHAI DDLHKLVNNY SINHENHDQY 300 NINPNILVPH FSNLQPPAPQ QQAVLALPGS LQAAFSDRLW DWSGVSEAGK DYTNLFNCKE

Sequence ? help Back to Top

Protein Sequence Length: 360 aa Download sequence

MAIAAAMNNQ QNNKQDEHEQ DIVMPGFRFH PTEEELVEFY LRRKVEGKRF NVELITFIDL  60
YRYDPWELPA LAAIGEKEWY FYVPRDRKYR NGDRPNRVTT SGYWKATGAD RMIKSENLRS  120
IGLKKTLVFY SGKAPKGIRT SWIMNEYRLP HHETERLQKA EISLCRVYKR AGVDDHASLP  180
RSLPTKSKSK NHTIDIFQAT YGGSSQQNDA KIVESSPSSS ADIGTNLALS QQNSYAISPI  240
VPMDQTPSIS PDDDHRIMMM QQSKNSCSNM IFSSSSSHAI DDLHKLVNNY SINHENHDQY  300
NINPNILVPH FSNLQPPAPQ QQAVLALPGS LQAAFSDRLW DWSGVSEAGK DYTNLFNCKE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02450.1	1e-111	NAC family protein