PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN03598.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family G2-like
Protein Properties Length: 313aa    MW: 33769.7 Da    PI: 6.7917
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN03598.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like103.99.8e-334397155
     G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                kprlrWt +LHerFv+av+qLGG+ kAtPk+i+++m+vkgLtl h+kSHLQkYRl
  PIN03598.1 43 KPRLRWTADLHERFVDAVTQLGGASKATPKAIMRTMGVKGLTLFHLKSHLQKYRL 97
                79****************************************************8 PP
2Myb_DNA-binding67.52.4e-214596148
                     TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48
                     r+rWT++++e++vdav+qlGg    t+k+I+rtmg kg+tl ++ks++qky+
       PIN03598.1 45 RLRWTADLHERFVDAVTQLGGAskaTPKAIMRTMGvKGLTLFHLKSHLQKYR 96
                     89******************99*****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    
MFPRLIQPRE AILSPENIQV QSSGGYGQRG SGDPCLVLTS DPKPRLRWTA DLHERFVDAV  60
TQLGGASKAT PKAIMRTMGV KGLTLFHLKS HLQKYRLGKQ SGKEHGDASK DGSYLLDSPR  120
SSNSPQNLQA SDINEGYEVK EALRAQMEVQ SQLHLQVEAE KHLQIRQDAE KRYMAMLERA  180
CKMLADQILG SAVTNDDGDG YQGKGTKAAP NGSHNPLVSS YPSHSTDELG VSGPVEVPPS  240
LHQQRTDCST ESCLTSHESP VGLPREGSSP GGKRAMVNVD STNASFVWGE SDVYTPDLHI  300
VQGSSHGIAG CGV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13640.11e-67G2-like family protein