PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN03241.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family B3
Protein Properties Length: 379aa    MW: 42257.9 Da    PI: 7.1961
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN03241.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3101.54.7e-3283187199
                 EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SS.SEE..E CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.gr.sefelv 93 
                 f+kv tpsdv+k++rlv+pk++ae++    ++ +e++  l +ed++g+ W+++++y+++s++yv+tkGW++Fvk+++L++gD+v F++  g+  +++l+
  PIN03241.1  83 FDKVVTPSDVGKLNRLVIPKQHAEKYfpldSSTNEKGLLLNFEDRNGKPWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGiGElGKERLF 181
                 89***************************966778999*************************************************6559999***** PP

                 EEEE-S CS
          B3  94 vkvfrk 99 
                 + ++r+
  PIN03241.1 182 IDWRRR 187
                 ***998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 379 aa     Download sequence    
MNFMSGRSGF YEEPSGTPAR PISSSSSSLH HRPLPLYNAG APPPDSSPTN NGNAGDDDSD  60
DHTLIRRGGN EGSTAIIEKE HMFDKVVTPS DVGKLNRLVI PKQHAEKYFP LDSSTNEKGL  120
LLNFEDRNGK PWRFRYSYWN SSQSYVMTKG WSRFVKEKKL DAGDIVSFQR GIGELGKERL  180
FIDWRRRPDA PELLPQPLST PQQFSFHRWN NYNYNNNHSP FLLQPPTSRD YYYNYSNIAY  240
GNPCPVTYFR SAAGGGGRGG AGGVFGRPPQ VGLVHARIRE SGVEEMVYES VPVVQGKTAP  300
PKRLRLFGVT MDCPISDVSD ECDIMSTTTT LPLINHFDSS SSSSSIANSH QLTYNHPHHN  360
NDDYAEKGKG TSMSLDLDI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01030.11e-69B3 family protein