PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN03188.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family ERF
Protein Properties Length: 273aa    MW: 29429.3 Da    PI: 6.7701
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN03188.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.67.3e-1997146255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  y+GVr++  +g+Wv+eIr+p++   + r++lg++ tae+Aa+a++ a+++++g
  PIN03188.1  97 TYRGVRRRN-WGKWVCEIREPRK---KSRIWLGTYSTAEMAARAHDVAALAIKG 146
                 69****877.**********843...6***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    
MEEKIILDII AQDQLFSTST ATATATASSS ATSGGPISPS TASTSSSSLS SNGTQSTRSN  60
LNECSNVTKK VQGQKSGNED CKRQRSTAMG SSDKHPTYRG VRRRNWGKWV CEIREPRKKS  120
RIWLGTYSTA EMAARAHDVA ALAIKGQSAY LNFPHLAQYL PRPASTAPKD IQAAAAKAAE  180
ATFSRELSQC SSEAEPSQSK LSSSHSSTNL TSDNMQESSN SPSTAHDDDA FFDLPDLSLS  240
SSDHCNGFCY YACSWQLAGA DVGFRLEDPF LWE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44940.12e-44ERF family protein