PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN02826.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

NAC

Protein Properties

Length: 440aa MW: 49928.9 Da PI: 6.1382

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN02826.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	162.7	1.3e-50	76	201	1	127
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98 + pGfrF+Ptdeel+++yLkkk+eg+ + evi+evdi+++ePwdLp +++ ++++ew+fFs+r +ky++g++++rat+sgyWkatgk+++v+s +++ PIN02826.1 76 MFPGFRFSPTDEELIQYYLKKKLEGSCDGV-EVIPEVDICRYEPWDLPaQSIIQSDNEWFFFSPRGRKYPNGSQSKRATESGYWKATGKERSVKS-GSS 172 579********************99777.99***********767778899**********************************.999 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyr 127 ++g+k+tLvf++grapkg++t+W+mhey PIN02826.1 173 VIGTKRTLVFHTGRAPKGQRTEWIMHEYC 201 **************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 440 aa Download sequence
METCWLVSPR NLFFTLQNTS SQAYYTISAR NVQRKGFFCY LIGEEMGDED ERRRGCSSRN 60 TNSIPMEISL AEASSMFPGF RFSPTDEELI QYYLKKKLEG SCDGVEVIPE VDICRYEPWD 120 LPAQSIIQSD NEWFFFSPRG RKYPNGSQSK RATESGYWKA TGKERSVKSG SSVIGTKRTL 180 VFHTGRAPKG QRTEWIMHEY CTSEKSQDAM VVCRLRKNSE FRLNDNPRTN LPTERDLSTV 240 NNSPIALSGG EQSGMADGKV AESCSKEFSS SYNSHSVEQI DGYESDDKAT NEFSEHDTSS 300 LNKGCAEEED FYADIMKDDI IKLDDPSLNE NPESSTAKSK QPAETSLTIF PSHGTANRRL 360 RLRREKLISY QPGIEIYKFD KGDSHIGNAL DSHSQQRWCL LDTFPILRRK SASISMFLVL 420 LILLILVLFF MGHSWLTSKA

Sequence ? help Back to Top

Protein Sequence Length: 440 aa Download sequence

METCWLVSPR NLFFTLQNTS SQAYYTISAR NVQRKGFFCY LIGEEMGDED ERRRGCSSRN  60
TNSIPMEISL AEASSMFPGF RFSPTDEELI QYYLKKKLEG SCDGVEVIPE VDICRYEPWD  120
LPAQSIIQSD NEWFFFSPRG RKYPNGSQSK RATESGYWKA TGKERSVKSG SSVIGTKRTL  180
VFHTGRAPKG QRTEWIMHEY CTSEKSQDAM VVCRLRKNSE FRLNDNPRTN LPTERDLSTV  240
NNSPIALSGG EQSGMADGKV AESCSKEFSS SYNSHSVEQI DGYESDDKAT NEFSEHDTSS  300
LNKGCAEEED FYADIMKDDI IKLDDPSLNE NPESSTAKSK QPAETSLTIF PSHGTANRRL  360
RLRREKLISY QPGIEIYKFD KGDSHIGNAL DSHSQQRWCL LDTFPILRRK SASISMFLVL  420
LILLILVLFF MGHSWLTSKA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	358	365	RRLRLRRE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G44290.1	3e-80	NAC family protein