PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN02826.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family NAC
Protein Properties Length: 440aa    MW: 49928.9 Da    PI: 6.1382
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN02826.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM162.71.3e-50762011127
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98 
                 + pGfrF+Ptdeel+++yLkkk+eg+   + evi+evdi+++ePwdLp +++ ++++ew+fFs+r +ky++g++++rat+sgyWkatgk+++v+s +++
  PIN02826.1  76 MFPGFRFSPTDEELIQYYLKKKLEGSCDGV-EVIPEVDICRYEPWDLPaQSIIQSDNEWFFFSPRGRKYPNGSQSKRATESGYWKATGKERSVKS-GSS 172
                 579**********************99777.99***************767778899**************************************.999 PP

         NAM  99 lvglkktLvfykgrapkgektdWvmheyr 127
                 ++g+k+tLvf++grapkg++t+W+mhey 
  PIN02826.1 173 VIGTKRTLVFHTGRAPKGQRTEWIMHEYC 201
                 ****************************7 PP

Sequence ? help Back to Top
Protein Sequence    Length: 440 aa     Download sequence    
METCWLVSPR NLFFTLQNTS SQAYYTISAR NVQRKGFFCY LIGEEMGDED ERRRGCSSRN  60
TNSIPMEISL AEASSMFPGF RFSPTDEELI QYYLKKKLEG SCDGVEVIPE VDICRYEPWD  120
LPAQSIIQSD NEWFFFSPRG RKYPNGSQSK RATESGYWKA TGKERSVKSG SSVIGTKRTL  180
VFHTGRAPKG QRTEWIMHEY CTSEKSQDAM VVCRLRKNSE FRLNDNPRTN LPTERDLSTV  240
NNSPIALSGG EQSGMADGKV AESCSKEFSS SYNSHSVEQI DGYESDDKAT NEFSEHDTSS  300
LNKGCAEEED FYADIMKDDI IKLDDPSLNE NPESSTAKSK QPAETSLTIF PSHGTANRRL  360
RLRREKLISY QPGIEIYKFD KGDSHIGNAL DSHSQQRWCL LDTFPILRRK SASISMFLVL  420
LILLILVLFF MGHSWLTSKA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1358365RRLRLRRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G44290.13e-80NAC family protein