PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN02656.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

NAC

Protein Properties

Length: 379aa MW: 42369.4 Da PI: 5.0025

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN02656.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	91	2e-28	55	197	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk....leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra........tksgyW 83 lp+G++F+P+d el+ e+L++k+ + ++e+i++++ i++++P++Lp +k++ ++++fF + ++ya+g+rk+r ++ +W PIN02656.1 55 LPAGVKFEPSDIELL-EHLAAKCGVGGlephIFIDEFIPTLEgddgICYTHPENLP-GAKKDGSSIHFFYRITNAYASGRRKRRRiqdqentiKSNVRW 151 799**********.99887774555333334444423345******.556778899**************975677776544889 PP NAM 84 katgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 ++tgk+k+v++ +g +g kk++v+y ++ +k+ k++Wvmh y+l PIN02656.1 152 HKTGKTKPVME-NGIRKGFKKIMVLYaaAKKGSKPDKCNWVMHHYHL 197 *********.999*******6545667777*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 379 aa Download sequence
MARAWLMDSR GLAMKVKNAG LPAEYQIKDC GAKRQCPNCH YLIDNSDVSH DWPGLPAGVK 60 FEPSDIELLE HLAAKCGVGG LEPHIFIDEF IPTLEGDDGI CYTHPENLPG AKKDGSSIHF 120 FYRITNAYAS GRRKRRRIQD QENTIKSNVR WHKTGKTKPV MENGIRKGFK KIMVLYAAAK 180 KGSKPDKCNW VMHHYHLGTD VDEQEGEFVV SKIYYQTDKI ETSLLAEESD VGTAQVIPRT 240 PKTNTPEPPR PDKTPSSDFG SDDYLIQPLV QDLEYLKEQS HPSSGSQLKD ETENATCLAG 300 KSKAVNLSGA DSLFCNEIID SYAAFDDLRP NSNVSQRDDN ASCGIDELDN LELDTPPDFN 360 LPDLQFASQD SVFDWLDRL

Sequence ? help Back to Top

Protein Sequence Length: 379 aa Download sequence

MARAWLMDSR GLAMKVKNAG LPAEYQIKDC GAKRQCPNCH YLIDNSDVSH DWPGLPAGVK  60
FEPSDIELLE HLAAKCGVGG LEPHIFIDEF IPTLEGDDGI CYTHPENLPG AKKDGSSIHF  120
FYRITNAYAS GRRKRRRIQD QENTIKSNVR WHKTGKTKPV MENGIRKGFK KIMVLYAAAK  180
KGSKPDKCNW VMHHYHLGTD VDEQEGEFVV SKIYYQTDKI ETSLLAEESD VGTAQVIPRT  240
PKTNTPEPPR PDKTPSSDFG SDDYLIQPLV QDLEYLKEQS HPSSGSQLKD ETENATCLAG  300
KSKAVNLSGA DSLFCNEIID SYAAFDDLRP NSNVSQRDDN ASCGIDELDN LELDTPPDFN  360
LPDLQFASQD SVFDWLDRL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	131	139	GRRKRRRIQ
2	132	158	RRKRRRIQDQENTIKSNVRWHKTGKTK
3	133	137	RKRRR
4	134	138	KRRRI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01600.1	1e-99	NAC family protein