PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN02656.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family NAC
Protein Properties Length: 379aa    MW: 42369.4 Da    PI: 5.0025
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN02656.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM912e-28551971128
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkk....leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra........tksgyW 83 
                 lp+G++F+P+d el+ e+L++k+        + ++e+i++++    i++++P++Lp  +k++ ++++fF +  ++ya+g+rk+r          ++ +W
  PIN02656.1  55 LPAGVKFEPSDIELL-EHLAAKCGVGGlephIFIDEFIPTLEgddgICYTHPENLP-GAKKDGSSIHFFYRITNAYASGRRKRRRiqdqentiKSNVRW 151
                 799************.99****887774555333334444423345**********.556778899*****************975677776544889* PP

         NAM  84 katgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                 ++tgk+k+v++ +g  +g kk++v+y   ++ +k+ k++Wvmh y+l
  PIN02656.1 152 HKTGKTKPVME-NGIRKGFKKIMVLYaaAKKGSKPDKCNWVMHHYHL 197
                 ***********.999***********6545667777*********98 PP

Sequence ? help Back to Top
Protein Sequence    Length: 379 aa     Download sequence    
MARAWLMDSR GLAMKVKNAG LPAEYQIKDC GAKRQCPNCH YLIDNSDVSH DWPGLPAGVK  60
FEPSDIELLE HLAAKCGVGG LEPHIFIDEF IPTLEGDDGI CYTHPENLPG AKKDGSSIHF  120
FYRITNAYAS GRRKRRRIQD QENTIKSNVR WHKTGKTKPV MENGIRKGFK KIMVLYAAAK  180
KGSKPDKCNW VMHHYHLGTD VDEQEGEFVV SKIYYQTDKI ETSLLAEESD VGTAQVIPRT  240
PKTNTPEPPR PDKTPSSDFG SDDYLIQPLV QDLEYLKEQS HPSSGSQLKD ETENATCLAG  300
KSKAVNLSGA DSLFCNEIID SYAAFDDLRP NSNVSQRDDN ASCGIDELDN LELDTPPDFN  360
LPDLQFASQD SVFDWLDRL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1131139GRRKRRRIQ
2132158RRKRRRIQDQENTIKSNVRWHKTGKTK
3133137RKRRR
4134138KRRRI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01600.11e-99NAC family protein