PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN02618.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | YABBY | ||||||||
Protein Properties | Length: 191aa MW: 21659.8 Da PI: 9.1044 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 201 | 4.7e-62 | 3 | 157 | 6 | 170 |
YABBY 6 sseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvsseklsen 104 ++eq+Cy+ CnfCn +lavsvP +slf vvtvrCGhC++l +vn+a a q + ++ +++ ++ + +++k+ ++++ +++++ + + PIN02618.1 3 MAEQLCYIPCNFCNIVLAVSVPCNSLFDVVTVRCGHCSNLWTVNMAAAFQCVQVQPSWQDAQGPSYT------PSEYKVDLGSSSKWNNKMAIQP--SM 93 689*******************************************999999999875544444322......2222222222222222222211..22 PP YABBY 105 edeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170 ++++ pr v+rPPekrqrvPsayn+fikeeiqrika+nP+ishreafs+aaknWahfP+ihfgl PIN02618.1 94 TNKSEPR--IVNRPPEKRQRVPSAYNQFIKEEIQRIKANNPEISHREAFSTAAKNWAHFPHIHFGL 157 2333344..589****************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 191 aa Download sequence |
MDMAEQLCYI PCNFCNIVLA VSVPCNSLFD VVTVRCGHCS NLWTVNMAAA FQCVQVQPSW 60 QDAQGPSYTP SEYKVDLGSS SKWNNKMAIQ PSMTNKSEPR IVNRPPEKRQ RVPSAYNQFI 120 KEEIQRIKAN NPEISHREAF STAAKNWAHF PHIHFGLMLE SNQPTKLNEV LDGKGKGPEK 180 HKMRRTAILN K |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G26580.1 | 1e-81 | YABBY family protein |