PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN02370.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

TALE

Protein Properties

Length: 380aa MW: 43476.4 Da PI: 6.6453

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN02370.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.9	1.9e-09	308	342	21	55
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRake 55 k +yps++e+ LA+++gL+++q+ +WF N+R ++ PIN02370.1 308 KWPYPSESEKVALAESTGLDQKQINNWFINQRKRH 342 669*****************************885 PP
2	ELK	36	1.5e-12	262	283	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK++Ll+KYsgyL+sLkqE+s PIN02370.1 262 ELKNHLLKKYSGYLSSLKQELS 283 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 380 aa Download sequence
MEEYNHHQLS ENTNSRGSGG SFLYGGPVLA PSGSSNHHNQ LGMSGFHLQS GDCYDQSEGQ 60 HHPIVKTEGG STSQNHAPRF HYYSPSVIRG HPQNVQDQHH RRRQESHEIN PNEVDAIKAK 120 IIAHPQYSNL LEAYMDCQKV GAPPEVVARL TAVRQEFEAR QRAAAATAAN RDDSKDPELD 180 QFMEAYYDML VKYREELTRP LQEAMEFMRR IETQLNMLTN GPVRIFNSEE KCEGVGSSEE 240 DQDNSGGETG LPEIDPRAED RELKNHLLKK YSGYLSSLKQ ELSKKKKKGK LPKDARQKLL 300 SWWELHYKWP YPSESEKVAL AESTGLDQKQ INNWFINQRK RHWKPSEDMQ FMVMDGLHPQ 360 NAALYMEGHY MGEGPYRLGP

Sequence ? help Back to Top

Protein Sequence Length: 380 aa Download sequence

MEEYNHHQLS ENTNSRGSGG SFLYGGPVLA PSGSSNHHNQ LGMSGFHLQS GDCYDQSEGQ  60
HHPIVKTEGG STSQNHAPRF HYYSPSVIRG HPQNVQDQHH RRRQESHEIN PNEVDAIKAK  120
IIAHPQYSNL LEAYMDCQKV GAPPEVVARL TAVRQEFEAR QRAAAATAAN RDDSKDPELD  180
QFMEAYYDML VKYREELTRP LQEAMEFMRR IETQLNMLTN GPVRIFNSEE KCEGVGSSEE  240
DQDNSGGETG LPEIDPRAED RELKNHLLKK YSGYLSSLKQ ELSKKKKKGK LPKDARQKLL  300
SWWELHYKWP YPSESEKVAL AESTGLDQKQ INNWFINQRK RHWKPSEDMQ FMVMDGLHPQ  360
NAALYMEGHY MGEGPYRLGP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G08150.1	1e-126	TALE family protein