PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN02334.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family HD-ZIP
Protein Properties Length: 738aa    MW: 81724.6 Da    PI: 6.5065
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN02334.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox65.85.9e-21138193156
                 TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
    Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                 +++ +++t++q++eLe+lF+++++p++++r eL+k+l L++rqVk+WFqNrR+++k
  PIN02334.1 138 KKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMK 193
                 688999***********************************************999 PP
2START206.31.2e-643395641206
                 HHHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEEEEC CS
       START   1 elaeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetlevis 86 
                 ela++a++elvk+a+++ep+W + +    e++n +e+ ++f++  +     + +ea+r++g+v+ ++  lve+l+d++ +W e+++    + +t++vis
  PIN02334.1 339 ELALAAMDELVKMAQSGEPLWLRGYeggrEILNHEEYSRTFTPCIGmkpngFVSEASRETGMVIINSLALVETLMDSN-KWAEMFPciiaRTTTTDVIS 436
                 5899*************************************9998899******************************.******************** PP

                 TT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--..-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXX CS
       START  87 sg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe.sssvvRaellpSgiliepksnghskvtwvehvdlkgrlp 177
                 +g      galqlm aelq+lsplvp R++ f+R+++q+ +g+w++vdvS+d  ++ ++  +++  +++lpSg+++++++ng+skvtwveh++++++++
  PIN02334.1 437 NGmggtrnGALQLMHAELQVLSPLVPvREVNFLRFCKQHAEGVWAVVDVSIDTIRETSSgAPPYPSCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESVV 535
                 *********************************************************99**************************************** PP

                 HHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
       START 178 hwllrslvksglaegaktwvatlqrqcek 206
                 h+l+r+l++ g+ +ga++wvatlqrqce+
  PIN02334.1 536 HQLYRPLISAGMGFGAQRWVATLQRQCEC 564
                 ***************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 738 aa     Download sequence    
MNFGDFLDNN SCSSSGARIV ADLSYNNSNN NDSNTITTTP GSSNNNNNNN MPVGSIAFVS  60
QSLASKPIFN SPGLSLALQT GMEGHGGEVA RIGENYESSN NICGRRSRDE EHESRSGSDN  120
MEGASGDDQD AADKPPRKKR YHRHTPQQIQ ELESLFKECP HPDEKQRLEL SKRLCLETRQ  180
VKFWFQNRRT QMKTQLERHE NSILRQENDK LRAENMSIRE AMRNPMCTNC GGPAIMGEIS  240
LEEQHLRIEN ARLKDELDRV CALAGKFLGR PISSLAASMG QPMPNSSLEL GVGSNGFGGL  300
NPPLGPPDFG SPLPAMPSTK TTMNMTPIER SLERSMYLEL ALAAMDELVK MAQSGEPLWL  360
RGYEGGREIL NHEEYSRTFT PCIGMKPNGF VSEASRETGM VIINSLALVE TLMDSNKWAE  420
MFPCIIARTT TTDVISNGMG GTRNGALQLM HAELQVLSPL VPVREVNFLR FCKQHAEGVW  480
AVVDVSIDTI RETSSGAPPY PSCRRLPSGC VVQDMPNGYS KVTWVEHAEY DESVVHQLYR  540
PLISAGMGFG AQRWVATLQR QCECLAILMS SSVSTRDHSA ITPGGRRSML KLAQRMTNNF  600
CAGVCASTVH QWNKLRTENV DEDVRVMTRK SVDDPGEPPG IVLSAATSVW LPVSPQRLFA  660
FLRNEHMRSE WDILSNGGPM QEMAHIAKGQ EHGNCVSLLR ASVSLYFTLC TCLLLTFYVI  720
NKLSFSTYSI CVHIIIET
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00730.10.0HD-ZIP family protein