PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN02277.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

TCP

Protein Properties

Length: 268aa MW: 30345.7 Da PI: 8.2593

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN02277.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	104.5	1.7e-32	46	131	3	84
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt..................ssssaseceaesssssas 83 g+kdrhsk++T +g+RdRRvRls+++a++++dLqd+LGf ++sk ++WLl++ak +i+el+ + + s+s PIN02277.1 46 GGKDRHSKVCTVRGLRDRRVRLSVPTAIQLYDLQDRLGFNQPSKVVDWLLNAAKNEIDELPPLqipqgffsqhglnphefiD--------------SQS 130 79*************************************************************4444444444333332221..............111 PP TCP 84 n 84 + PIN02277.1 131 K 131 1 PP

Sequence ? help Back to Top
Protein Sequence Length: 268 aa Download sequence
MIQREAEFSK KSDDAKITKA ASSSSSPTTW SRLKDPRVVR VSRSFGGKDR HSKVCTVRGL 60 RDRRVRLSVP TAIQLYDLQD RLGFNQPSKV VDWLLNAAKN EIDELPPLQI PQGFFSQHGL 120 NPHEFIDSQS KDVLETSEGQ RQYNLENDDQ SGFVSTNVVR WDPSNLSLSY PPQRVGFSTP 180 PQNEDLHNFS RLVQLPSVMS HVPSGSHQVF ICQPYFPSQT GATNMEFDPK QSNFQSSELS 240 NSTLTLPLDS TSQHLRPFHF KEQNKQNS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60970.1	3e-45	TCP family protein