PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN02198.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

TALE

Protein Properties

Length: 293aa MW: 33203.5 Da PI: 6.7556

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN02198.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	24.3	5.3e-08	242	275	21	54
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRak 54 k +yp+++++++L +++gL+ +q+ +WF N+R + PIN02198.1 242 KWPYPTEDDKAKLVEQTGLQLKQINNWFINQRKR 275 469*****************************87 PP
2	ELK	25.5	3e-09	196	217	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK +L++++++++ ++++E++ PIN02198.1 196 ELKIELKQGFKSRIEDVREEIL 217 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 293 aa Download sequence
MQEQGISMMG SGGIGGISDQ SMAVSGELHH HLKAEIATHP LYEQLLSAHV ACLRVATPID 60 QLPLIDAQLS QSHHILRSYA QNAAHTLSPH ERQELDNFLA QYLLVLCSFR EQLQQHVRVH 120 AVEAVMACRE IEQNLQTLTG ATLGEGTGAT MSDDEDELQM DFSLDQSGGE GHDLMGFGPL 180 LPTESERSLM ERVRQELKIE LKQGFKSRIE DVREEILRKR RAGKLPGDTT TVLKNWWQQH 240 SKWPYPTEDD KAKLVEQTGL QLKQINNWFI NQRKRNWHSN SQSATSLKSK RKR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	273	293	RKRNWHSNSQSATSLKSKRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62990.1	1e-158	TALE family protein