PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN02136.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family C3H
Protein Properties Length: 434aa    MW: 46806.5 Da    PI: 9.4529
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN02136.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH19.12.4e-06525526
                --SGGGGTS--TTTTT-SS-SS CS
     zf-CCCH  5 lCrffartGtCkyGdrCkFaHg 26
                +Cr++++ G C+ G++C+F+H+
  PIN02136.1  5 PCRHYLQ-GRCHEGEKCNFSHD 25
                8******.*************6 PP
2zf-CCCH231.4e-075979525
                --SGGGGTS--TTTTT-SS-S CS
     zf-CCCH  5 lCrffartGtCkyGdrCkFaH 25
                +C+++  +G+C++G+ C F+H
  PIN02136.1 59 PCNNYTTNGFCSRGSDCLFSH 79
                7******************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 434 aa     Download sequence    
MIKTPCRHYL QGRCHEGEKC NFSHDAVPLT KSQPCRYFAC HTCMKGDDCP FDHQLSKYPC  60
NNYTTNGFCS RGSDCLFSHE IPAKQSFPVT PNVSKPELTC VKGGSSTISK FTKPEAKFPS  120
QLNNSNSSKH TDNSGIFHQK VDAKFSSAGN SPGMSAELVG AKAVPRTTGL TPKGVSFLSN  180
GGMSLVDRSR HKRDTSVKDN VGIDVSCKTI LKMPGNVNKL SNMSDGVASR KPRGINFLSF  240
THPSSDGSVG EMFSDLLSNS NNEAGKSVLD DMGKGELACS LPQSVGMLKV NRQMNQSATN  300
LVPASNEKVN GTPSRVPQHI NFLNFDRISA DGAILKEGGK SPSSKDETAL SFVKERRNTQ  360
GDLQEATKRP SLSFDELTGQ STSGHNANLS TYFKTSLLSN TPSSVQKAVQ SALSFAAKFE  420
SNIKVGSSLH QQRS