PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN02135.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | HSF | ||||||||
Protein Properties | Length: 394aa MW: 45897.6 Da PI: 6.2106 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 112 | 4.1e-35 | 63 | 155 | 2 | 103 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl+k++e+++d+e++++isws++ nsfv++d+++f++++Lpk+Fkh+nf+SFvRQLn+Y F+k+++++ weF++++F++gk +ll++ik PIN02135.1 63 FLRKTFEMVDDPETDSIISWSSSRNSFVIWDPHKFSTDLLPKHFKHNNFSSFVRQLNTYRFRKIDSDK---------WEFANEHFQQGKMHLLKHIK 150 9****************************************************************999.........******************** PP XXXXX CS HSF_DNA-bind 99 rkkse 103 r+k++ PIN02135.1 151 RRKQN 155 **986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 394 aa Download sequence |
MALEMAENEL KMVKSEENGG KLMENGNSIG NGDEVLIKEE AFEWEETHPK PIEGLKETGP 60 PPFLRKTFEM VDDPETDSII SWSSSRNSFV IWDPHKFSTD LLPKHFKHNN FSSFVRQLNT 120 YRFRKIDSDK WEFANEHFQQ GKMHLLKHIK RRKQNSQTMH QQLTTQSWLD PTKHRVESEL 180 ERLKTDQKAL QTEVINLRRQ QEVTQHYLAA VKERLHITET RQKHLTLFVF KYLNNPVFLQ 240 HFIETMKRKR ALTDGGILKK RRIMESKEAN ETTINTDEFA HGSIDDKRLQ VSEELTTSHS 300 EIQTLFSPDD SGSHSQEQRT ENSPEKNSLD SSSENFVLWE KLMEDDMIYE DDAAASKQQS 360 NIVSEFEDLI AKQSECGVRM RGLVKPVGFP AYIA |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 146 | 152 | LKHIKRR |
2 | 247 | 262 | KRKRALTDGGILKKRR |
3 | 248 | 263 | KRKRALTDGGILKKRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G26150.1 | 8e-71 | HSF family protein |