PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN02122.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

NAC

Protein Properties

Length: 372aa MW: 43510.1 Da PI: 4.7302

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN02122.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	148.7	2.8e-46	18	149	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk... 95 lppG+rF+Pt+eelv++yLk+k+++++++l i+ev++y+++P++L + +e++ w+fF++r++ky++g r+nra+ +gyWkatgkdk++ ++ PIN02122.1 18 LPPGYRFRPTEEELVCHYLKRKIDNEPVPL-AEISEVKLYHHNPQTLAeRYPPTEDNGWFFFTPRERKYKNGLRPNRAAGTGYWKATGKDKPIEATigt 115 79**************************.66**********8445567899********************************999888 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128 kg+ vg kk+Lvfy+g+a++g+kt+W+mhey+l PIN02122.1 116 dKGAIVGYKKSLVFYQGTARNGVKTHWIMHEYTL 149 88888*************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 372 aa Download sequence
MEEELLRHYL KDWRKQLLPP GYRFRPTEEE LVCHYLKRKI DNEPVPLAEI SEVKLYHHNP 60 QTLAERYPPT EDNGWFFFTP RERKYKNGLR PNRAAGTGYW KATGKDKPIE ATIGTDKGAI 120 VGYKKSLVFY QGTARNGVKT HWIMHEYTLN RPRGNRRGSE DMKLDDWVLC RIYENVDKSK 180 DKKNQRQKDH ENISPSSATA CDESESSDQE DEVNDGDDCE ESDPLVDNKM NPDQVLVIED 240 QKYLMGQENN SNYTNDPVMI NNMSSYDHGY YALQTQSPNV VIVSNYDQVP QFPVPLTKMD 300 IDQQYPLISN TNVRFEGNDN EATLDYGFNQ QEFYSFVQPE DYVKTGINCV NYDCEDNGPN 360 IEEYYYRRRF SQ

Sequence ? help Back to Top

Protein Sequence Length: 372 aa Download sequence

MEEELLRHYL KDWRKQLLPP GYRFRPTEEE LVCHYLKRKI DNEPVPLAEI SEVKLYHHNP  60
QTLAERYPPT EDNGWFFFTP RERKYKNGLR PNRAAGTGYW KATGKDKPIE ATIGTDKGAI  120
VGYKKSLVFY QGTARNGVKT HWIMHEYTLN RPRGNRRGSE DMKLDDWVLC RIYENVDKSK  180
DKKNQRQKDH ENISPSSATA CDESESSDQE DEVNDGDDCE ESDPLVDNKM NPDQVLVIED  240
QKYLMGQENN SNYTNDPVMI NNMSSYDHGY YALQTQSPNV VIVSNYDQVP QFPVPLTKMD  300
IDQQYPLISN TNVRFEGNDN EATLDYGFNQ QEFYSFVQPE DYVKTGINCV NYDCEDNGPN  360
IEEYYYRRRF SQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04070.2	2e-53	NAC family protein