PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN02056.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | Whirly | ||||||||
Protein Properties | Length: 255aa MW: 28020.1 Da PI: 10.3186 | ||||||||
Description | Whirly family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Whirly | 202.3 | 5.9e-63 | 79 | 216 | 1 | 138 |
Whirly 1 svyktkaalkvkavrptfealdsgnlklkraGglllelanataerkydWekkqsfalsatevaelvdlaskesceffhdpaakgsneGkvrkalkvePl 99 s++k+kaal+ ++++ptf++ +sg k++r+G ++l++ +a++erkydWek+q+falsatev++l++l+sk+sceffhdp++ +sn+G+vrk+l+++ + PIN02056.1 79 SIFKGKAALSADPRLPTFSKSESGGYKVDRRGVIMLTFWPAIGERKYDWEKRQKFALSATEVGSLISLGSKDSCEFFHDPSMLSSNAGQVRKTLSIKAH 177 79************************************************************************************************* PP Whirly 100 pdGsGlfvnlsvtnslvkgnesfsvPvskaefavlrsll 138 +dGsG+f++l+v n+++k+n++f+vPv+ aefav+r ++ PIN02056.1 178 ADGSGYFISLNVVNNILKTNDRFVVPVTTAEFAVMRAAF 216 ************************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 255 aa Download sequence |
MPIGGSSRQK VSCFHTVVAM LKLSRLLLHS SSRIAFSGKS LFNEAASDFK LLRGITTQGG 60 MSTAMSNVGP DAKIFAPYSI FKGKAALSAD PRLPTFSKSE SGGYKVDRRG VIMLTFWPAI 120 GERKYDWEKR QKFALSATEV GSLISLGSKD SCEFFHDPSM LSSNAGQVRK TLSIKAHADG 180 SGYFISLNVV NNILKTNDRF VVPVTTAEFA VMRAAFTFAL PHIMGWDQYT NQLPYQASRS 240 SPKTVPELQS AEWDR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G71260.1 | 5e-94 | Whirly family protein |