PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN01977.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

G2-like

Protein Properties

Length: 354aa MW: 39466.8 Da PI: 7.9411

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN01977.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	102.1	3.4e-32	177	230	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt++LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ PIN01977.1 177 PRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 230 9****************************************************7 PP
2	Myb_DNA-binding	48.7	1.8e-15	178	229	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWTt ++ ++v+av++lGg+ t+k++ + m k +tl ++ks++q+y+ PIN01977.1 178 RMRWTTTLHARFVHAVELLGGHeraTPKSVLELMDvKDLTLAHVKSHLQMYR 229 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 354 aa Download sequence
MELFPAQPDL SLQISPPNTK PSSSWRTSQD NEMDLGFWKR ALDSRNSTSS SIDARFDLSL 60 SNPARVSDPN GFSSSNHFHH HLLHGGSAAR FLQPGHLLHQ GFAEELNFLR PIRGIPVYQN 120 PQSFPFAAHQ QHLDAQTPSS AATNHVQTAS SVPYHSHSLM RSRFLSRFPA KRSMRAPRMR 180 WTTTLHARFV HAVELLGGHE RATPKSVLEL MDVKDLTLAH VKSHLQMYRT VKSTDRAAAN 240 SGQSDAFENG SSGDTSDDFL FDIQKSEASV QKGRTIITDQ EKEHYGLWTN SSSGEAWLHG 300 RPKDCEGNMQ SLEKDMEPKC SRSYDRVSDV SSSSISETAS PKKPNLEFTL GTPQ

Sequence ? help Back to Top

Protein Sequence Length: 354 aa Download sequence

MELFPAQPDL SLQISPPNTK PSSSWRTSQD NEMDLGFWKR ALDSRNSTSS SIDARFDLSL  60
SNPARVSDPN GFSSSNHFHH HLLHGGSAAR FLQPGHLLHQ GFAEELNFLR PIRGIPVYQN  120
PQSFPFAAHQ QHLDAQTPSS AATNHVQTAS SVPYHSHSLM RSRFLSRFPA KRSMRAPRMR  180
WTTTLHARFV HAVELLGGHE RATPKSVLEL MDVKDLTLAH VKSHLQMYRT VKSTDRAAAN  240
SGQSDAFENG SSGDTSDDFL FDIQKSEASV QKGRTIITDQ EKEHYGLWTN SSSGEAWLHG  300
RPKDCEGNMQ SLEKDMEPKC SRSYDRVSDV SSSSISETAS PKKPNLEFTL GTPQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32240.1	2e-98	G2-like family protein