PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN01738.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family bHLH
Protein Properties Length: 297aa    MW: 33294.9 Da    PI: 5.514
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN01738.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH25.42.5e-08117162555
                 HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 h ++Er+R + + ++f++L  ++P +     + ++K ++L+ A++Y+++L+
  PIN01738.1 117 HIAAERKRGEMLSQRFATLSAMVPGL-----TEMDKTSMLRDAIKYVNHLE 162
                 899**********************9.....89****************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    
MDNCDFMDSI NEEFAAILGD DFPNISSSSE TFNNTAGSSC TNSWCGEQSP VGIDQIPPVP  60
IMLNVGGPIS SENPKQVNWR DEEFEALGSE GFLRDEGSKL KSRPCKRVRA ASQTYDHIAA  120
ERKRGEMLSQ RFATLSAMVP GLTEMDKTSM LRDAIKYVNH LEDKVKTLEE QASKRTIKSV  180
VLVKKSSKTT NEDTNDQSPY RKRDFPEIEV RLYNNQILLR IQCEKIKGIL VKLLGKVEKH  240
NLTVISSNVL PFGNLALDIT IIAEMEKEST VLLKEIVEVI HSTLVKYTTK NLSNFSD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.11e-29bHLH family protein