PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN01702.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | NAC | ||||||||
Protein Properties | Length: 236aa MW: 26741.5 Da PI: 10.2798 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 127.4 | 1.1e-39 | 15 | 141 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknr.atksgyWkatgkdkevlsk.kg 97 lp GfrFhPtdeelv +yL++kv +++l++ vi+e+++++++PwdLp + +++ +fF+++ +++ +k ++ at+ gyWkatgk+k++++ ++ PIN01702.1 15 LPIGFRFHPTDEELVIHYLRRKVCSQPLPA-GVIPELEVLQTNPWDLPGDL---KEKRHFFCQKIRRNLMNKCNSTfATDCGYWKATGKNKPIMAPgRN 109 699***************************.99***************554...45789****999988766666669*****************8566 PP NAM 98 elvglkktLvfykg.rapkgektdWvmheyrl 128 ++g+kk++vfy+g ++++g kt+W+mhe+ l PIN01702.1 110 FVIGIKKSFVFYQGrTRSRGLKTQWIMHEFCL 141 67***********94567899*********87 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 236 aa Download sequence |
MERANSEDGN GGVKLPIGFR FHPTDEELVI HYLRRKVCSQ PLPAGVIPEL EVLQTNPWDL 60 PGDLKEKRHF FCQKIRRNLM NKCNSTFATD CGYWKATGKN KPIMAPGRNF VIGIKKSFVF 120 YQGRTRSRGL KTQWIMHEFC LAASVNSPHL TQKLMVQVGD WVACRVYQWK RKARNQGTAN 180 QVANKNKNKK KPRTLQENNE LGFSISQTSS SSCSSGITEI SSSELDQEAS SQNISF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13180.1 | 8e-48 | NAC family protein |