PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN01572.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | NAC | ||||||||
Protein Properties | Length: 396aa MW: 44761.6 Da PI: 7.3692 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 170.2 | 6.4e-53 | 12 | 141 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka...eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 +ppGfrFhPtdeel+++yLkkk++ +k+++ evi+evd++k+ePw+L++++k ++ewyfFs++d+ky+tg+r+nrat++g+Wkatg+dk + + + PIN01572.1 12 VPPGFRFHPTDEELLHFYLKKKISFQKFDM-EVIREVDLNKIEPWELQERCKIgstPQNEWYFFSHKDRKYPTGSRTNRATSAGFWKATGRDKCIRN-S 108 69****************************.99**************964444222455*************************************9.8 PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrle 129 +++g++ktLvfy+grap+g+ktdW+mheyrle PIN01572.1 109 FKKIGMRKTLVFYRGRAPHGQKTDWIMHEYRLE 141 899****************************85 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 396 aa Download sequence |
MAAGSSAGGG GVPPGFRFHP TDEELLHFYL KKKISFQKFD MEVIREVDLN KIEPWELQER 60 CKIGSTPQNE WYFFSHKDRK YPTGSRTNRA TSAGFWKATG RDKCIRNSFK KIGMRKTLVF 120 YRGRAPHGQK TDWIMHEYRL EDSDNDPQPT EDGWVVCRVF KKKNLFKVGN SEGGGGGHNI 180 NQNGMVMSSS CDQLNMSSTS ASATSCSQSR SFFTQRNDAA FNQYLLHPHP ADLNYSHIPV 240 PPHHQYPQLE AQNFISTHNH INKPLMLNIT SNYDHHNLSA LPNSTTTDYD HHHSPAAIAS 300 MQVKQFMSSN TNANTSTRDD CESASPAPAN YQACEPGIEC DQSSQPVVAR DDQNLNEWDR 360 LVIASSHHQD ANHPSSINQI NHLTLRSEMD FWAYGK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G10350.1 | 1e-108 | NAC family protein |