PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN01352.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | NAC | ||||||||
Protein Properties | Length: 408aa MW: 47051.9 Da PI: 4.6577 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 148.5 | 3.4e-46 | 18 | 149 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk... 95 lppG+rF+Pt+eelv++yLk+k+++++++l i+ev++y+++P++L + +e++ w+fF++r++ky++g r+nra+ +gyWkatgkdk++ ++ PIN01352.1 18 LPPGYRFRPTEEELVCHYLKRKIDNEPVPL-AEISEVKLYHHNPQTLAeRYPPTEDNGWFFFTPRERKYKNGLRPNRAAGTGYWKATGKDKPIEATigt 115 79****************************.66**************8445567899************************************999888 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128 kg+ vg kk+Lvfy+g+a++g+kt+W+mhey+l PIN01352.1 116 dKGAIVGYKKSLVFYQGTARNGVKTHWIMHEYTL 149 88888***************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 408 aa Download sequence |
MEEELLRHYL KDWRKQLLPP GYRFRPTEEE LVCHYLKRKI DNEPVPLAEI SEVKLYHHNP 60 QTLAERYPPT EDNGWFFFTP RERKYKNGLR PNRAAGTGYW KATGKDKPIE ATIGTDKGAI 120 VGYKKSLVFY QGTARNGVKT HWIMHEYTLN RPRGNRRGSE DMKLDDWVLC RIYENVDKSK 180 DKKNQRQKDH ENISPSSATA CDESESSEQE DEVNDGDDCE ESDPLVDNKT NLDQVLMIED 240 QKYIMGLENN SNYTNDPVMI NNMSSYDHGY YALQTQSPNV VIVTNYDQVP QFPVPLTKMD 300 IDQQYPLISN TNVRFEGNDN EATLDYGFNQ QECYSFVQPE DYVTTGINYV NYDCEDNGPN 360 IEGCSAGCSD VQVQKVPNES TTVVGASHND AAKNNHSDYW RPLSWSVW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G04070.2 | 6e-53 | NAC family protein |