PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN01123.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

FAR1

Protein Properties

Length: 763aa MW: 87843.2 Da PI: 8.2825

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN01123.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	66.4	7.4e-21	39	128	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +fY +Y++e+GF++r+ ++k+ ++g + +r++vCs g+r++ ++ + +rr ++ r+gCka+++v++++ dg ++vtk+ +HnH+la PIN01123.1 39 SFYFNYGRELGFDIRRYSKKTD-KHGVVRNREWVCSFAGFRQSPNEGYVCRRRATPDLRCGCKARFRVSRDStDGMYKVTKFIPDHNHPLA 128 59************987766.8889**************999********************9**************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 763 aa Download sequence
MVNSNSDNDE IAASRLGGNV VDPGNVLQSV FKTDEEADSF YFNYGRELGF DIRRYSKKTD 60 KHGVVRNREW VCSFAGFRQS PNEGYVCRRR ATPDLRCGCK ARFRVSRDST DGMYKVTKFI 120 PDHNHPLATD ETSHLLKCNR YMSIPHKTLL SGLTGSGIRA CKAMNYLEHI EGGPGKLPFR 180 RKDGYNFLYK QKIESTRDGD VKTAISLLQD LQTHDKELIF DFTLDSDNVL TRLFWIDGMS 240 RAQFKMFGDV LLFDSTYKTN AYRFPLVMLC GVDNHFKTCV FGAAILYNET VESYCWLLQK 300 FKEAVGSAPL CVLTDQDAAM RAAIKFEYPE AKHRICSWHL ERNALRNVGK RRFVADFGDL 360 ITTNYNVDDF EIAWQNLVQK HDVANHPWVL DVYNDKESWS EAHCRGYFMA MMTSTQRAES 420 MNSYLKLDMN PELNLCDFLK HFHTCLGKMR ASFLENQIAA ERYRPSLKSK VLRSLENHAA 480 TLYTRKIFEK VQDEIIAEQG LILQEAMKEN DKIFTFIFVP YDNQLANACC LIINWLKGTF 540 ECQCLMLESD GIPCRHIISA LKYLQQTEIP KPIIKYRWTV DIGVKLRKEF HSPFPFEDPQ 600 RRRYAQLHKE CAELCLLSSQ TEEATAKTIN RLHALVESVQ PHKMRCCSDD KIEDMNHEKR 660 NHSGQFDNIS STPEIRDPKR KRSRGAVRAK KQHCGRCGQP GHKVGTCKEN LDTMKETCGD 720 QVNTKGTKFP IRARKKNRRG ELPLAPTLET GPPNDENHED ECI

Sequence ? help Back to Top

Protein Sequence Length: 763 aa Download sequence

MVNSNSDNDE IAASRLGGNV VDPGNVLQSV FKTDEEADSF YFNYGRELGF DIRRYSKKTD  60
KHGVVRNREW VCSFAGFRQS PNEGYVCRRR ATPDLRCGCK ARFRVSRDST DGMYKVTKFI  120
PDHNHPLATD ETSHLLKCNR YMSIPHKTLL SGLTGSGIRA CKAMNYLEHI EGGPGKLPFR  180
RKDGYNFLYK QKIESTRDGD VKTAISLLQD LQTHDKELIF DFTLDSDNVL TRLFWIDGMS  240
RAQFKMFGDV LLFDSTYKTN AYRFPLVMLC GVDNHFKTCV FGAAILYNET VESYCWLLQK  300
FKEAVGSAPL CVLTDQDAAM RAAIKFEYPE AKHRICSWHL ERNALRNVGK RRFVADFGDL  360
ITTNYNVDDF EIAWQNLVQK HDVANHPWVL DVYNDKESWS EAHCRGYFMA MMTSTQRAES  420
MNSYLKLDMN PELNLCDFLK HFHTCLGKMR ASFLENQIAA ERYRPSLKSK VLRSLENHAA  480
TLYTRKIFEK VQDEIIAEQG LILQEAMKEN DKIFTFIFVP YDNQLANACC LIINWLKGTF  540
ECQCLMLESD GIPCRHIISA LKYLQQTEIP KPIIKYRWTV DIGVKLRKEF HSPFPFEDPQ  600
RRRYAQLHKE CAELCLLSSQ TEEATAKTIN RLHALVESVQ PHKMRCCSDD KIEDMNHEKR  660
NHSGQFDNIS STPEIRDPKR KRSRGAVRAK KQHCGRCGQP GHKVGTCKEN LDTMKETCGD  720
QVNTKGTKFP IRARKKNRRG ELPLAPTLET GPPNDENHED ECI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-83	FAR1 family protein