PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN00439.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

NAC

Protein Properties

Length: 597aa MW: 66381.8 Da PI: 5.824

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN00439.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	171	3.7e-53	13	149	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.. 95 lp+GfrF+Ptdeelv++yL+ k++g + + evi+evd++k+ePwdLp+ +k+++ ew+fF++rdkky++g+r+nrat++gyWkatgkd++++s+ PIN00439.1 13 LPKGFRFRPTDEELVNHYLRLKINGCHSAV-EVIPEVDVCKWEPWDLPAlsVIKSDDPEWFFFCPRDKKYPNGHRSNRATEAGYWKATGKDRTIKSRks 110 799**********************888.99***********4447888888**********************************977 PP NAM 96 ......kgelvglkktLvfykgrapkgektdWvmheyrl 128 +++l+g+kktLvfykgrapkge+t+W+mheyr+ PIN00439.1 111 sssgrsDSHLIGMKKTLVFYKGRAPKGERTNWIMHEYRA 149 6666655556*************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 597 aa Download sequence
MESSRSTMKL EALPKGFRFR PTDEELVNHY LRLKINGCHS AVEVIPEVDV CKWEPWDLPA 60 LSVIKSDDPE WFFFCPRDKK YPNGHRSNRA TEAGYWKATG KDRTIKSRKS SSSGRSDSHL 120 IGMKKTLVFY KGRAPKGERT NWIMHEYRAT EPDLDGTGPG QGDYVICRLF HKADEKLDKL 180 KYDEVEHIGS VPSTSKSSPD DASSDLFPEP AMLDTQILKE PGDIKTWRAD QADCMTPTNL 240 APVESCASAG GDQSGEETAM EIRDEYLTHA GQHLSILNDK EFKPELAYCD GARMGSPFGD 300 DFGKSGLHFQ DGTSEQDASL SELLESLQNH GNHFYKESTS HKTDDVTREN FIPGYIDGAQ 360 KTPSDICKVN DSKIYGEMDE KDVKEQAFMF PNNFQVAPSN DHSNSNCPVE EDSLVNVVKG 420 SYCKPFETVY HTNTSRDDSD RVNETGIKIQ SRQPQDRPSS VNSTSQGTAS RRIRLLTGFG 480 PNFICREKSK VEKHESESLI TPATKDVDRI SQSQGSEDGI LSENKDTQTC DPAVAVKNSQ 540 HGSAKMAPFK LSTTFSASRG SSSSYSKVYV ASIYVVIILS VVFLGMWISP SLHALHG

Sequence ? help Back to Top

Protein Sequence Length: 597 aa Download sequence

MESSRSTMKL EALPKGFRFR PTDEELVNHY LRLKINGCHS AVEVIPEVDV CKWEPWDLPA  60
LSVIKSDDPE WFFFCPRDKK YPNGHRSNRA TEAGYWKATG KDRTIKSRKS SSSGRSDSHL  120
IGMKKTLVFY KGRAPKGERT NWIMHEYRAT EPDLDGTGPG QGDYVICRLF HKADEKLDKL  180
KYDEVEHIGS VPSTSKSSPD DASSDLFPEP AMLDTQILKE PGDIKTWRAD QADCMTPTNL  240
APVESCASAG GDQSGEETAM EIRDEYLTHA GQHLSILNDK EFKPELAYCD GARMGSPFGD  300
DFGKSGLHFQ DGTSEQDASL SELLESLQNH GNHFYKESTS HKTDDVTREN FIPGYIDGAQ  360
KTPSDICKVN DSKIYGEMDE KDVKEQAFMF PNNFQVAPSN DHSNSNCPVE EDSLVNVVKG  420
SYCKPFETVY HTNTSRDDSD RVNETGIKIQ SRQPQDRPSS VNSTSQGTAS RRIRLLTGFG  480
PNFICREKSK VEKHESESLI TPATKDVDRI SQSQGSEDGI LSENKDTQTC DPAVAVKNSQ  540
HGSAKMAPFK LSTTFSASRG SSSSYSKVYV ASIYVVIILS VVFLGMWISP SLHALHG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35580.1	1e-107	NAC family protein