PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN00272.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family C3H
Protein Properties Length: 357aa    MW: 39688.5 Da    PI: 7.7165
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN00272.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH22.42.2e-07124145426
                 ---SGGGGTS--TTTTT-SS-SS CS
     zf-CCCH   4 elCrffartGtCkyGdrCkFaHg 26 
                 + C++f++ G C+ Gd C +aHg
  PIN00272.1 124 SACPDFRK-GACRKGDACEYAHG 145
                 67******.*************9 PP

Sequence ? help Back to Top
Protein Sequence    Length: 357 aa     Download sequence    
MMSWSNPTVE IPSWDYHHLE DPTAHIHSPV AHSSPDTCHY ENAFAALQRY LPANKDDIVP  60
ADGEDSEDFD VPVDAFSCDD FRMFEFKVKK CGLARSHDWT ACPFAHPGEK ARRRDPRKYH  120
YSGSACPDFR KGACRKGDAC EYAHGVFECW LHPARYRTQP CKDGTHCRRR VCFFAHTAEQ  180
LRVLPYSSSP DASPSQIGQD PFVSVGFFSS SPKSTLYSPP PSSPTTGSPP VSPSGSMRLN  240
SVNQLTESMR SLQLNKMKMG MGLSASPPSW GGRIGSPRSS PTVRPGFTSL PSTPIRRLSA  300
FDHWGTHCEE EPVMERVESG KQLRERIYAK LVKENSLDRV NSAGPGPDVG WVAELVK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29190.11e-104C3H family protein