PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN00195.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | G2-like | ||||||||
Protein Properties | Length: 442aa MW: 49156.1 Da PI: 5.2676 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 104.8 | 5e-33 | 242 | 296 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r+rWtpeLHe Fveave+LGGse AtPk +l+lm+vkgLt++hvkSHLQkYR+ PIN00195.1 242 KARMRWTPELHETFVEAVEKLGGSELATPKGVLKLMNVKGLTIYHVKSHLQKYRT 296 68****************************************************8 PP | |||||||
2 | Myb_DNA-binding | 59.7 | 6.3e-19 | 244 | 295 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++e +v+av++lGg t+k + + m+ kg+t +++ks++qky+ PIN00195.1 244 RMRWTPELHETFVEAVEKLGGSelaTPKGVLKLMNvKGLTIYHVKSHLQKYR 295 89******************99*****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 442 aa Download sequence |
MTPALFKKKA SETISNDEEA SGSSSGLSRI LPTPSEEKFP KLPDSPQVTL SQELSTNLIS 60 SSNNKTVGHL FSSASDYPSN LRHSMSFDSS RPKALPFISK QLKDGATFAS SQLSPSVIRA 120 RQLDCCDVEN NDVSWNTDAS NNFLDVPLNA PVDDSQVETC TKKTDWRDWA DQLITVDDDM 180 CGSNLSDLLV DVNVPDLDAK LLELPSDISV CHTQINQHHH IPTSSGQSCP LVTSPCASPV 240 AKARMRWTPE LHETFVEAVE KLGGSELATP KGVLKLMNVK GLTIYHVKSH LQKYRTARHK 300 PESSEGTPEK KLKNVAERTS LDLKTMMGIT EALRLQMEVQ KQLHDQLEIQ RNLQLRIEEQ 360 GKHLQTMFEK QRKMEEERLK ASSSNIDEPS QLSTIEKDTK EDEDTNTNEI SSETKTSEDK 420 EPDADACRPP AKRAKADEMV KS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G28610.1 | 3e-78 | G2-like family protein |