PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN00150.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family WRKY
Protein Properties Length: 512aa    MW: 56037.7 Da    PI: 6.7134
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN00150.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY79.34.1e-25205260359
                 -SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                 DgynWrKYGqK+vk+ e +rsYYrCt+++C +kk +e++++ ++++e++Y+g Hnh+
  PIN00150.1 205 DGYNWRKYGQKQVKSPEGSRSYYRCTFSDCYAKK-IECCDNSNHLTETVYRGPHNHD 260
                 9*******************************98.*********************7 PP
2WRKY92.92.3e-29380436359
                 -SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                 Dgy+WrKYGqK+vkg+++pr+YYrCtsagCpv+k++e++ +++  v+itY g H+h+
  PIN00150.1 380 DGYRWRKYGQKMVKGNPHPRNYYRCTSAGCPVRKHIEKAMDNTGEVVITYMGVHDHD 436
                 9*******************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 512 aa     Download sequence    
MEEENNRSSG ALQDTENESS RLSSGGQEEK VGEKVEKNEE QRRVCSGSSN DCGVGNSSRG  60
ETKASDSETL ASVQVSEGEF QADFDESSHV LSEVPVEFSL QPLLPAEELK DQGRTAHEES  120
PKDVTGQSSQ VQKQHQVPLP DGSSELELSP TSVTKSNSSI PSRTLPEQKL QTVKNGNNDC  180
LTNRDKQNSS NPKPSSVVSM LKNPDGYNWR KYGQKQVKSP EGSRSYYRCT FSDCYAKKIE  240
CCDNSNHLTE TVYRGPHNHD PPNKLNCTRE NRPALPIMPV NGKNDTSHPV GGVNGPVPSA  300
PSREPILGID EVSETKQQES SGSESDDTVE INMKEESADG PECKNRPKRN STGELEALSK  360
PGKKPKYVVH AAGNVGISGD GYRWRKYGQK MVKGNPHPRN YYRCTSAGCP VRKHIEKAMD  420
NTGEVVITYM GVHDHDKPVP KKRHGPKNTH LVASSPLSAD NLHSNTKTHK SKTERSVDNE  480
GELTGEALNI CKEKASDSAR AVLSIGFEIK PC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G30935.11e-100WRKY family protein