PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIM99924.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

bHLH

Protein Properties

Length: 553aa MW: 59301.3 Da PI: 5.9239

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIM99924.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	35.7	1.6e-11	365	407	7	54
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++ErrRR+++N+++ Lr+++Pk + K++ a+iL A++Y+k+L PIM99924.1 365 MAERRRRKKLNDRLYMLRSVVPKiS------KMDRASILGDAIDYLKEL 407 79*******************66......**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 553 aa Download sequence
MLSRVNSMVW MEGNKGDEET NNNGGLGNKE DMEIGALSTF KSMLEGEDED WYLTAAAAGC 60 GGGHHQATMH GHHDISFSPS FTEAADNHHL LLQPVDSSAS CSPTSASVFS NLDPSQHQVN 120 YFLQPKSLIN AIPNNPLEGS FDLGCESAYL DSALDRAGGM ILSGGFNDLG GHAQMGSLNL 180 TSNTQFGTNS LLQLPQGNGG FGALGFGDGS IQANSFFFNR SKILKPLDNF ATTGAQPTLF 240 QKRAALRKNL GINSGSNLGP LNLGAMTNQI SLKSPTSASN VQKGEVNEEN NERKRKSTSG 300 DDVEDASIDG SNLNYDSDDQ FMENSGVNKV EESAKNGASS SHANSMVTGG DRKGKKKGLP 360 AKNLMAERRR RKKLNDRLYM LRSVVPKISK MDRASILGDA IDYLKELLQK INDLHNELES 420 IPAGSTVTPP TSFYPLTPTA SGIPARIKEE LCPSAFASPL SSPTGQPARV EVRLREGRAV 480 NIHMFCGRRP GLLLSTLRAI DNLGLDVQQA VISCFNGFAM DIFRAEQCGE GQELNPDQIK 540 AVLLDSAGFH GMV

Sequence ? help Back to Top

Protein Sequence Length: 553 aa Download sequence

MLSRVNSMVW MEGNKGDEET NNNGGLGNKE DMEIGALSTF KSMLEGEDED WYLTAAAAGC  60
GGGHHQATMH GHHDISFSPS FTEAADNHHL LLQPVDSSAS CSPTSASVFS NLDPSQHQVN  120
YFLQPKSLIN AIPNNPLEGS FDLGCESAYL DSALDRAGGM ILSGGFNDLG GHAQMGSLNL  180
TSNTQFGTNS LLQLPQGNGG FGALGFGDGS IQANSFFFNR SKILKPLDNF ATTGAQPTLF  240
QKRAALRKNL GINSGSNLGP LNLGAMTNQI SLKSPTSASN VQKGEVNEEN NERKRKSTSG  300
DDVEDASIDG SNLNYDSDDQ FMENSGVNKV EESAKNGASS SHANSMVTGG DRKGKKKGLP  360
AKNLMAERRR RKKLNDRLYM LRSVVPKISK MDRASILGDA IDYLKELLQK INDLHNELES  420
IPAGSTVTPP TSFYPLTPTA SGIPARIKEE LCPSAFASPL SSPTGQPARV EVRLREGRAV  480
NIHMFCGRRP GLLLSTLRAI DNLGLDVQQA VISCFNGFAM DIFRAEQCGE GQELNPDQIK  540
AVLLDSAGFH GMV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	355	373	KKKGLPAKNLMAERRRRKK
2	367	374	ERRRRKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G26744.1	1e-127	bHLH family protein