PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIM99548.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | NAC | ||||||||
Protein Properties | Length: 369aa MW: 42488.8 Da PI: 6.7733 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 51.2 | 4.2e-16 | 14 | 62 | 1 | 50 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkk 50 lppGfr+hPtdeelv +yL++k+ +k++++ +vi e+d+yk++P++Lp++ PIM99548.1 14 LPPGFRYHPTDEELVFYYLTRKIYSKRHRI-DVIGETDVYKWDPEELPER 62 79*************************999.99**************963 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 369 aa Download sequence |
MKVDADSFGN EDILPPGFRY HPTDEELVFY YLTRKIYSKR HRIDVIGETD VYKWDPEELP 60 ERLDPYTSGI QSTLCDHSFR CSCVSKWTYL SCPVRRLCQQ PDEKPACAVC GSFKNIWVCL 120 ICGFVGCGRY EKGHASGHWS DTQHHFSLEL QKQRIWDYVG DKYVHRLNQS RAEGKSVIAN 180 SRCSSAEECE TCGYEEEEGL DGALFSSKIE GTLDEYNRLL ASQLDIHRQH YELLLAEARS 240 GKESSTAKAV EKAIFSKTHE LEYKLEKCAD EKKAVADRNQ ELMKKQEFLQ NKFKEIEERE 300 RSLLKSKDEQ ISDLQEQIRD LKVYVEVQRM VTNMGDSNGI KGGTILPVEK NQLSSGNSKR 360 RSKSGRHRN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G34190.1 | 1e-16 | NAC family protein |