PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIM99359.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

Trihelix

Protein Properties

Length: 403aa MW: 45515.3 Da PI: 9.6799

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIM99359.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	55.9	1.2e-17	31	122	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm...rergferspkqCkekwenlnkrykkikegekkrtsess...stcpyfdqle 86 +Wt++e laLi+a+re++ +lrrg l+ ++W++v++++ +s+ qC++k+e+l++ry+++k+++ + +++ s++ +f+++e PIM99359.1 31 CWTQEEALALIDAYRERWYALRRGYLRTADWDAVAAAVasrCPASPAKSSAQCRHKMEKLRQRYRAEKQRALSFPDPNGryfSSWFFFENME 122 8***********************************5432234489*******************98776333221225677777776 PP

Sequence ? help Back to Top
Protein Sequence Length: 403 aa Download sequence
MSSPTTALPT ADAVTVADPV EKAPRKFPPP CWTQEEALAL IDAYRERWYA LRRGYLRTAD 60 WDAVAAAVAS RCPASPAKSS AQCRHKMEKL RQRYRAEKQR ALSFPDPNGR YFSSWFFFEN 120 MEAMENGTTP RTSAQKAENS AEESRLKSFL DQNIVKLKLK ARNNVDSGTD LGFDPGVKAK 180 RFNSLSQTPS KYSAYLDSQV EDDDMPEDED HINSIERRTQ PIDGIPKPLF KPKSKKSGKV 240 FNNNFDASGG FHQQTLPPGL RINRFPNFNP STDSNNNRNN PNGEFWVKIS NNNTDYNNSS 300 AAKYYPSLNP LADSRAAING SKRGRNAVEE MAESIKVLGE GFMKMEKAKM EMAREMEAMR 360 MEMEMKRNEM LLESQKQIVD AFLKGLFELK KSKKLKAADS AET

Sequence ? help Back to Top

Protein Sequence Length: 403 aa Download sequence

MSSPTTALPT ADAVTVADPV EKAPRKFPPP CWTQEEALAL IDAYRERWYA LRRGYLRTAD  60
WDAVAAAVAS RCPASPAKSS AQCRHKMEKL RQRYRAEKQR ALSFPDPNGR YFSSWFFFEN  120
MEAMENGTTP RTSAQKAENS AEESRLKSFL DQNIVKLKLK ARNNVDSGTD LGFDPGVKAK  180
RFNSLSQTPS KYSAYLDSQV EDDDMPEDED HINSIERRTQ PIDGIPKPLF KPKSKKSGKV  240
FNNNFDASGG FHQQTLPPGL RINRFPNFNP STDSNNNRNN PNGEFWVKIS NNNTDYNNSS  300
AAKYYPSLNP LADSRAAING SKRGRNAVEE MAESIKVLGE GFMKMEKAKM EMAREMEAMR  360
MEMEMKRNEM LLESQKQIVD AFLKGLFELK KSKKLKAADS AET

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G44730.1	2e-28	Trihelix family protein