PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIM99236.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

Trihelix

Protein Properties

Length: 397aa MW: 43128.2 Da PI: 7.8065

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIM99236.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	60.2	5.1e-19	90	176	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm..rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W++ + +L+ea++e+ +l+rg+l++ +Weev++ + r + ++s +qCk+k +nl+kryk ++++ +++ s+s++p+++q+e PIM99236.1 90 EWSDTAISCLLEAYSEKFAQLNRGNLRGRDWEEVAATVseRCESQTKSVEQCKNKVDNLKKRYKLERHRLSNG-GVSTSHWPWYKQME 176 5***********************************666677899********************99.667779*****8 PP

Sequence ? help Back to Top
Protein Sequence Length: 397 aa Download sequence
MASCDDDFSL LDDHQNPNSA QPSTATTTQT PPYQINPYEH DSDPFDSEPD PNSISGKRLA 60 DRDDMHSGTS KRTRLPSSGG SGDYRKDREE WSDTAISCLL EAYSEKFAQL NRGNLRGRDW 120 EEVAATVSER CESQTKSVEQ CKNKVDNLKK RYKLERHRLS NGGVSTSHWP WYKQMEQIVG 180 NSLAARAAVE EEKSSGGGGT SYSARQSKRL GPATISPGGQ VSSLKSKPSN NLRWRRVVFK 240 ISGPALAGSA PNNVDPKVIM LIAGEVSIAC HLGVEVAIVV GGRNFFCGDT WVTSTGLDRC 300 TAYQIGMMAT VMNSILLQSA LEKLGVQTRV QSAFSMPEAV EPYSRQRAIR HLEKGRVIIF 360 GGIGAATGNP LFSTDTAAAL RASEIHADAV LKGTNVD

Sequence ? help Back to Top

Protein Sequence Length: 397 aa Download sequence

MASCDDDFSL LDDHQNPNSA QPSTATTTQT PPYQINPYEH DSDPFDSEPD PNSISGKRLA  60
DRDDMHSGTS KRTRLPSSGG SGDYRKDREE WSDTAISCLL EAYSEKFAQL NRGNLRGRDW  120
EEVAATVSER CESQTKSVEQ CKNKVDNLKK RYKLERHRLS NGGVSTSHWP WYKQMEQIVG  180
NSLAARAAVE EEKSSGGGGT SYSARQSKRL GPATISPGGQ VSSLKSKPSN NLRWRRVVFK  240
ISGPALAGSA PNNVDPKVIM LIAGEVSIAC HLGVEVAIVV GGRNFFCGDT WVTSTGLDRC  300
TAYQIGMMAT VMNSILLQSA LEKLGVQTRV QSAFSMPEAV EPYSRQRAIR HLEKGRVIIF  360
GGIGAATGNP LFSTDTAAAL RASEIHADAV LKGTNVD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10030.2	1e-161	Trihelix family protein