PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIM99204.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | bHLH | ||||||||
Protein Properties | Length: 245aa MW: 26769.5 Da PI: 9.3921 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 41.3 | 2.7e-13 | 51 | 97 | 3 | 54 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h+e+ErrRR+riN +++L+++lP+a K +Ka+ L +Av+ +++L PIM99204.1 51 TSHKEAERRRRKRINGHIATLKSILPNA-----IKTDKASLLGEAVRRVREL 97 79*************************9.....79***********999888 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 245 aa Download sequence |
MYSVPSFYEL GSCSESYDIL EGLLSTSATE GEEGNLSPKS MAEAKAVAAS TSHKEAERRR 60 RKRINGHIAT LKSILPNAIK TDKASLLGEA VRRVRELKKA TSELTGIDNN NNKNNYSNDS 120 TSNTPSLKFM FPTETDELKV CHCNEGNNNP GLIKATLCCE DRPEIVLDLI QALKSVEAKV 180 IRAEMSTVGG RTKSVLWVRM AVGSESDVGL GRLRRALKMV MDKSTLLAGS GQGLPGNKRA 240 RYYQL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68810.1 | 3e-40 | bHLH family protein |