PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIM99174.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family MYB_related
Protein Properties Length: 319aa    MW: 35909.9 Da    PI: 5.1413
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIM99174.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding30.67.7e-1067107345
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 
                      ++T++E+el +++++  G++ W  Ia+ ++ g+t++++k  w+
       PIM99174.1  67 SFTPQEEELVIQLHAAIGSR-WPIIAQQLP-GKTDNDVKILWN 107
                      79******************.*********.*******97776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    
MVKSPCSEKL KGLCEEDESA KMATYGSKHY RTGSWTTFSK RSGQRRSGKS SREKWVSNQK  60
EDSKNKSFTP QEEELVIQLH AAIGSRWPII AQQLPGKTDN DVKILWNSKL RKKLSAMGID  120
PVTHKPFSQI LADYGNIGAF PKARTRFSSL SRDLKNAIMF KSEQQPQTFP NSDHHFSSAV  180
KTEPYDLYSQ IQAVNLVTET TNYTQSENAT PHFMNECASS SDSPSSAINQ EISSFSWSDF  240
LLEEAFLPPE IDGEKDKGIV LECDDRIDGL GSYGAVEDKN GFEVSSSSNC SSSFVEAMLE  300
RQDEMFPQIP GFYEEIFYY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18960.11e-33MYB_related family protein