PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIM98948.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family GeBP
Protein Properties Length: 187aa    MW: 21063.8 Da    PI: 10.1367
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIM98948.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57335.23.4e-1145904898
      DUF573 48 kvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWgs 98
                ++s+sq++ KirrLK+K++k  ++     + s++++hd++i+e+ ++iWg+
  PIM98948.1 45 QFSESQITHKIRRLKEKYHKLART-----KSSIKTAHDRDIYEIGRQIWGK 90
                89*****************99998.....789*****************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 187 aa     Download sequence    
MNSGSSSKSP SQPPSSSVKL FTEEDEINIL RSLLNSAGNS YTAGQFSESQ ITHKIRRLKE  60
KYHKLARTKS SIKTAHDRDI YEIGRQIWGK EKTRMPSPPP VDRERKEKAS ESSKEGAINW  120
SGFPYMMKEV SRAFPGCEDL YKQGLTSLGQ DILKGLEERW KALAEEEAAI QAKQARLFWG  180
RLKSGGL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28040.11e-07GeBP family protein