PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIM98771.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

NAC

Protein Properties

Length: 309aa MW: 35655.5 Da PI: 7.6274

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIM98771.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	176.7	6.2e-55	17	143	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 lppGfrFhPtdeel+++yL kkv + ++++ ++ +vd+++vePw+Lp ++k +ekewyfF+ rdkky+tg+r+nrat++gyWkatgkdke+++ +++l PIM98771.1 17 LPPGFRFHPTDEELITHYLSKKVLDPSFSA-IAVGDVDMNTVEPWELPWRAKVGEKEWYFFCVRDKKYPTGRRTNRATAKGYWKATGKDKEIFR-GKTL 113 79***********************999.88***********988999*************************************.999 PP NAM 100 vglkktLvfykgrapkgektdWvmheyrle 129 vg+kktLvfykgrapkgekt+Wv+heyrle PIM98771.1 114 VGMKKTLVFYKGRAPKGEKTNWVIHEYRLE 143 ****************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 309 aa Download sequence
MEKNSFGVVK RDDQMELPPG FRFHPTDEEL ITHYLSKKVL DPSFSAIAVG DVDMNTVEPW 60 ELPWRAKVGE KEWYFFCVRD KKYPTGRRTN RATAKGYWKA TGKDKEIFRG KTLVGMKKTL 120 VFYKGRAPKG EKTNWVIHEY RLEGKFSVQN LPEQVKRNDW VISRVFHKTS GGKKLHISEP 180 MRTNFQENIS SPSIMPPLID PSPTSERIKP IEPEPKLEHV HCFSNSMTAP EENQENLNTF 240 FDNPIFPSFP VDPFFTNLIE NYGQNMNQGF RKEKKMVSLS QEMGTIAFEE QEAAASSVGA 300 EDLDCIWSY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G61430.1	1e-112	NAC family protein