PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIM98752.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

MYB

Protein Properties

Length: 307aa MW: 34428.4 Da PI: 8.701

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIM98752.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.6	1.3e-17	42	89	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+eEdell++++k+ G g+W+t +++ g+ R++k+c++rw +yl PIM98752.1 42 RGPWTAEEDELLANYIKREGEGRWRTLPKKAGLLRCGKSCRLRWMNYL 89 89****************************99**********97 PP
2	Myb_DNA-binding	50.4	5.2e-16	95	140	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg +++E++l+++++++lG++ W++Ia +++ gRt++++k++w+++l PIM98752.1 95 RGHISPDEEDLIIRLHRLLGNR-WSLIAGRIP-GRTDNEIKNYWNTHL 140 67779***************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 307 aa Download sequence
MRSPSSSSTK QTAVSVKGRG GRRGSGKKAE ATPCCSKEGL KRGPWTAEED ELLANYIKRE 60 GEGRWRTLPK KAGLLRCGKS CRLRWMNYLR PSVKRGHISP DEEDLIIRLH RLLGNRWSLI 120 AGRIPGRTDN EIKNYWNTHL SKKLISQGID PKTHKPINPK NPSINIDHAN NVKKKLDQYS 180 TSSEPLLLDN SSSAVPINPN HLPFASENVT TISKEYQLLE DGSKDGDHNY LDEDGSKKVL 240 MKNSTDREGN NISTNEENIA SDDTINLCPD DAFSSLLNSL INDDMFSNQH QDQHEQQQQQ 300 QSSSSLI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13540.1	3e-84	MYB family protein