PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIM98723.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | NAC | ||||||||
Protein Properties | Length: 314aa MW: 34990.4 Da PI: 7.7854 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 175 | 2.1e-54 | 14 | 142 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 lppGfrFhPtdeel+++yL kkv + ++ ++i+e+d++k+ePw+Lp k+k +e+ewyfFs rd+ky+tg r+nrat++gyWkatgkd+e++s+ + + PIM98723.1 14 LPPGFRFHPTDEELITYYLFKKVLDCGFTS-RAIAEADLNKCEPWHLPGKAKMGENEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSSkSCS 111 79*************************999.89***************99999****************************************984556 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrle 129 lvg+kktLvfy+grapkgek++Wvmheyrle PIM98723.1 112 LVGMKKTLVFYRGRAPKGEKSNWVMHEYRLE 142 7****************************85 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 314 aa Download sequence |
MEKNYQYERN ESHLPPGFRF HPTDEELITY YLFKKVLDCG FTSRAIAEAD LNKCEPWHLP 60 GKAKMGENEW YFFSLRDRKY PTGLRTNRAT EAGYWKATGK DREIYSSKSC SLVGMKKTLV 120 FYRGRAPKGE KSNWVMHEYR LEGKLAYHYL SRNSEEEWVI SRVFQKPGSS TSAAAGGGAR 180 KRPPSGGTTI TNISDVSSPS SVSLSPLVEL SSAGAAKEHV PCFSTTAAAS FNLNSLFDLP 240 PPPRPSSMAA LILDPISPLS SAFPENYFRP SVISAVHGGT DDEMFSYAGS LMSQWPAPEN 300 EKLCTNELDC MWSC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G53950.1 | 3e-99 | NAC family protein |