PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIM98331.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family NAC
Protein Properties Length: 313aa    MW: 35047.7 Da    PI: 4.4087
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIM98331.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM96.73.6e-30687181
         NAM  1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksg 81
                lppGfrFhPtdeelv +yL +k++g  +el evi+evd+yk+ePwdLp k  + +++ ewyf+s+rd+ky++g+r+nrat+sg
  PIM98331.1  6 LPPGFRFHPTDEELVAYYLDRKINGGIIEL-EVIPEVDLYKCEPWDLPdKsFLPSKDMEWYFYSPRDRKYPNGSRTNRATRSG 87
                79***************************9.99**************96435566888***********************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    
MGPMTLPPGF RFHPTDEELV AYYLDRKING GIIELEVIPE VDLYKCEPWD LPDKSFLPSK  60
DMEWYFYSPR DRKYPNGSRT NRATRSGRAP HGIRTDWVMH EYRLIESPST GGAASAGGGS  120
ALKDSYALCR VFKKNIVIPK AKESLGAAVD QMLWDDNGPT PETSRDQRED GEDEIVIKNH  180
EICSKNPSEA SSSDVTQGTP IAMGSKDDSV AQMTSDEVNS SIEQFHYYNG SDNMSNFIQD  240
YNYTGVFSES WYPPLALEDF PQIDLTQAKS SNEYTTSCDR LRECVNGIAT LEEINALCSS  300
HENINCQNYA GLN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G54330.15e-80NAC family protein